| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0113 |
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| Symbol | |
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| ID | 4580891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 105698 |
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| End bp | 106597 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639767431 |
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| Product | TIR protein |
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| Protein accession | YP_913926 |
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| Protein GI | 119382870 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0221539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00922586 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCGA ATGATCGAGC AATAGAGACG TTAAGGCGTG AGATCGCAAA ACTTCAAACA
GACGGAGCGG CCATCGCAAG AAAGGATGCC GGAATTCGGG CAAAACTTGC GAGCGCTATG
GCCGCTCAAG CAAAGGCAAA AACCGCACCC GCGCTTCGAT TGAAGCAGGC AGAGGCCTCC
CGCTTGGAAA AAGAGCTGAT GGCGACGAGC AAGAGCCAAG CTGACATCGC GACTAAGATT
GCAAAAAAGC AGAGCAGCCT CAGCGCGAAG CTGGTCGTTC AGGCGAATGA GGCGAAAAAA
GCCGATGCAA AGGCGAAAAA AAACCAGGAG CGAGTGTCGA AAACACAGGA GGAAGCAACC
AGAAAGCTTG AAGCCGGGTA TCGAAAGCTG ACTTTGGAGA ACCAATCATT GGAACAGCGT
CTTCAACGCG AGCTGTCAGC GATGAAGCCA ACAGCTGGCC CGACGACCAA CGCCGATCTT
ACCTCCGCTC CCCCGCATGA CATTTTCATC TCACACGCTT GGGAAGACAA AGCCGACTTC
GTAGAGGCCC TGGCACACAC TCTGAGGGCT GCGGGCGCAG AGGTCTGGTA TGATGACTTT
TCGCTTCGTC CTGGTGACAG CCTCCGCCGA TCTATTGATA AGGGTTTGGG CTCCAGTCGC
TTCGGTATCG TCGTGTTGTC GACCCACTTT TTCAAGAAGG AGTGGCCTCA GAAAGAGCTG
GACGGGTTAT TTCAGTTGGA ATCGTCCGGT AGGTCTCGAA TACTGCCAAT CTGGCACAAG
GTCTCGAAGG ACGAGGTGGC GAGCTTCAGT CCAACGATGG CCGACAAACT TGCCTTCAAC
ACTTCGACCA AAAGCGTGGA CGAGATTGTT GCCGACCTTA TGGCGATTAT CAGAGATTGA
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| Protein sequence | MSANDRAIET LRREIAKLQT DGAAIARKDA GIRAKLASAM AAQAKAKTAP ALRLKQAEAS
RLEKELMATS KSQADIATKI AKKQSSLSAK LVVQANEAKK ADAKAKKNQE RVSKTQEEAT
RKLEAGYRKL TLENQSLEQR LQRELSAMKP TAGPTTNADL TSAPPHDIFI SHAWEDKADF
VEALAHTLRA AGAEVWYDDF SLRPGDSLRR SIDKGLGSSR FGIVVLSTHF FKKEWPQKEL
DGLFQLESSG RSRILPIWHK VSKDEVASFS PTMADKLAFN TSTKSVDEIV ADLMAIIRD
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