| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0109 |
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| Symbol | |
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| ID | 4580887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 101268 |
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| End bp | 102167 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639767427 |
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| Product | AraC-like transcriptional regulator |
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| Protein accession | YP_913922 |
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| Protein GI | 119382866 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00170035 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00915457 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGAACG ATCATCTTGC CCCGCTCAAA CATCTGATCG CCCGCCAGTG GCAGGCGCAT
GGCCGGGAAA CCCCGATCGA GGGGCTGTTG CTGACCTCGG TCACGGCGCC GACCGGGCCG
ATCCATGCCG TTTATCGCCC GTCGCTCTGC GTGGTGGTGC AGGGCGTCAA GACCAGCATG
CTTGGCGATC GCGCCTATCG CTATGACGCC GGTAAATGCC TGATCGCGTC GATGGAGGTG
CCGATCCGGG CCGAGATCTC CCACGCCACG CCCGACCGGC CCTACCTGGC CTTCAGCCTG
GCCTTGGACC CCGGGACGAT CTCGGACCTG TTGCTGGCGC TGGATGGCAC CGACGACGCC
CCCGCCGGTG CGGCGCTGGC GGTCCATGCT TTTGGGCCGG AGCTTGCCGA TCCCCTCTGC
CGGTTGCTGG CCCTGTGCGA CCGGCCGCGC GACATCGCGA TCCTCGCGCC GCTGGCCCGG
CGGGAGATCA CCTGGCTTCT GCTGAATGGA CCGATGGGGC CGGCGCTGCG CCAGATCGGC
CTGGCGGGCA GCCGCATGGC GCGGATCGGC CGGGCCATCG CCTGCATCCG CGAGGGCTTC
GCGGATCAGC TGAACGTGCG GCGGCTCGCC GATGTCGCGG GGATGAGCCC CGCGACCTTC
CACCGCCACT TCAAGGCGGT CACGGCGATG ACGCCGGTGC AGTACCAGAA ACAGCTTCGC
TTGCAGGAAG CGCGCCGCCT GCTGCTTTCC GAGCACGCCG ATGTCGCCCG GATCGGCTAC
GCCATCGGCT ATGAGAGCCC GTCGCAGTTC AACAGGGAAT ATCGCCGCCT GTTCGGATCG
CCCCCGGGAC GGGATGGGCA GGAGATCCGC AGGAGCCTCA CCCCGCAGGT CGGGGGCTGA
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| Protein sequence | MENDHLAPLK HLIARQWQAH GRETPIEGLL LTSVTAPTGP IHAVYRPSLC VVVQGVKTSM
LGDRAYRYDA GKCLIASMEV PIRAEISHAT PDRPYLAFSL ALDPGTISDL LLALDGTDDA
PAGAALAVHA FGPELADPLC RLLALCDRPR DIAILAPLAR REITWLLLNG PMGPALRQIG
LAGSRMARIG RAIACIREGF ADQLNVRRLA DVAGMSPATF HRHFKAVTAM TPVQYQKQLR
LQEARRLLLS EHADVARIGY AIGYESPSQF NREYRRLFGS PPGRDGQEIR RSLTPQVGG
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