| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0047 |
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| Symbol | |
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| ID | 4579078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 37512 |
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| End bp | 39392 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639767358 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_913860 |
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| Protein GI | 119382804 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.928233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGGGA CGGACATGCC CTCGAACGAC CGGCACGCCG AGCTGACCCG CTCGGGGTTG
AACCTGATCC AGCAGGCGAT CTCGATCTTC GACGCCGACC TGCGGCTGGC CGTCAGCAAT
CGCCCCTATC AGGCGATGTT CGGCCTGCCG GACAAACTGA CCCGCGCCGG CGCCACCTTC
CAGGACACGA TCCGCTATCT GGTCCATCGC GGCGAATACG GCCCCCAGGA CGACCCCGAG
GCCGCGATCC GCGAGCGCGT CGACCAGGCC CGCACCTTCC AGCCGCATTA CATGGAGCGA
AAGCGCGCCG ACGGCCGCTG GATCTCGGTC GAGGGGGCGC CCCTGTCGCA GGGCGGCTGG
ATCGCCGTCT ATACCGACAT CACCCATATC AAGCGGCAGG AGGAACTGCT GCGCGCCCGG
TCCGAGGAAC TCTCCGAACG GGTGCTGGAG AATGCCGAGC GGCTTTCGGC CGCGAACCGG
GCGCTGGCCG CGACCAATGC CGCGCTGGAG GAGGCAAAGC GCATCCTGAC CGAATCCGAG
GCCCGCACCC GCCATGTCAC CGCCATGGTC CCGGCCCATA TCGCGCATAT GGACCGGGAC
TATCGCTATA CCTTCTCGAA CAACCAGATC TCGATGGTGT TCCCGGGCTC GAACGCGTCG
ATCATCGGCC GGCAATGCGA AACGGTGCTG GGGGCCGAGA CCTTCGCCCG CATCCGCCCG
CATCTGGACC GCGCCATCGC CGGCCAGCCG CAGGTATTCG AGATCACGCA CCCGCCCTCG
GGCCGACGCA TCCGCATCGC GCTGACCCCG GACCAGAACG GGCGCGGCGT CTATATCCTG
TCAACCGACG TCACCGCCGA GGTGCAGGCG CGCGAGGCGC TGACCCATGC GGCCAAGCGC
GCGGTGGCGG CGCAGATGAC CTCGGGGCTG GCGCATGACT TCGGCAACCT GCTGACCATC
ATCCTGGGCC TGCAGGGCCG GCTGGCCCGC GCCGGGCTGC CGCCCGAACA GGCCGAGGAC
GTGCAGGCCA CGCTGGCCGC CGCCCGGCGC GGGGTGCGCC TGCTCGACGG CATCTCGGCG
CTGACCGGCG GGCGCGAGCA CCAGCCGCAG CCGGTCGAAC TGCGCGCCAT GCTGGACGAC
CTGGCGGCGA TGACCCGGCC GACGCTGGGC GCCGGCGTTG CGCTGGACAG CCGCATCGGC
GAGCTGCCGG CGCGGGTGAT GCTGGACCCC GGCGCGTTGC AGGACGCACT GCTCAACCTG
ATCCTGAACG CGCGCGACGC CATGCGGGGC CAGGGCCGCA TCACGGTCGA GGCCCGGCCC
GCCGGGCGCT GGCTGGAAAT CTCGGTCACC GATACCGGCC CGGGTTTTTC CGACGAGGCG
CTGGCGCGGG CCACCGAGCC CTTCTTCACC ACCAAGGGCA GCCAGGGCAC CGGCCTTGGC
CTGTCGATGG TCTATGACCA GATCAAGCTT TCGGGCGGCA CCCTGCGGCT TGGCAATGCC
GAAAGCGGCG GTGCCCGGAT CACCATCCGG CTGCCGCTGC GCGCCGTGCG CCCGCATCTG
GTGCTGCTGG TCGAGGACGA CGACGCCATC CGCGCCCATA TCCGCGAGAT GCTGACCGCC
CAGGGCCATT CCGTGATCGA AGCCGGCTCG CTCTCCGAGG CGCGCGGCCT GACCGACCTC
GCCGGCCTGA CGCTGATCCT GTCCGACCTG CAACTGGGCG ACGGCTCGGG CGCTGATCTG
CGGGGCTGCG GCCTGCCTCT GATCCTGATG ACGGCGCTGC CGCCGGGCGA TCCGCGCAGA
TCGGGGCTTG ACTGCCCGGT CCTGACCAAG CCCTTTGGCG ACACCGAACT GGCCCTGGCC
ATGGCAGAGA CCGATGACTG A
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| Protein sequence | MLGTDMPSND RHAELTRSGL NLIQQAISIF DADLRLAVSN RPYQAMFGLP DKLTRAGATF
QDTIRYLVHR GEYGPQDDPE AAIRERVDQA RTFQPHYMER KRADGRWISV EGAPLSQGGW
IAVYTDITHI KRQEELLRAR SEELSERVLE NAERLSAANR ALAATNAALE EAKRILTESE
ARTRHVTAMV PAHIAHMDRD YRYTFSNNQI SMVFPGSNAS IIGRQCETVL GAETFARIRP
HLDRAIAGQP QVFEITHPPS GRRIRIALTP DQNGRGVYIL STDVTAEVQA REALTHAAKR
AVAAQMTSGL AHDFGNLLTI ILGLQGRLAR AGLPPEQAED VQATLAAARR GVRLLDGISA
LTGGREHQPQ PVELRAMLDD LAAMTRPTLG AGVALDSRIG ELPARVMLDP GALQDALLNL
ILNARDAMRG QGRITVEARP AGRWLEISVT DTGPGFSDEA LARATEPFFT TKGSQGTGLG
LSMVYDQIKL SGGTLRLGNA ESGGARITIR LPLRAVRPHL VLLVEDDDAI RAHIREMLTA
QGHSVIEAGS LSEARGLTDL AGLTLILSDL QLGDGSGADL RGCGLPLILM TALPPGDPRR
SGLDCPVLTK PFGDTELALA MAETDD
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