| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0038 |
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| Symbol | thiE |
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| ID | 4578892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 31391 |
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| End bp | 31987 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639767349 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_913851 |
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| Protein GI | 119382795 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.539865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGATTGC CGCGTTTCTA TCCGATCTTC GACAGCAGCG ACTGGCTGCG CCGCGCCCTG
CCGCTGGGCG TGAAGCTGGT GCAGATCCGC ATCAAGGACC AGCCCCCCGC CCGGCTCTTG
GGTGAACTGG CTCTGTGCCA GGAGCTTTGC CGCGAACATG GCGCCATGCT GGTCGTCAAC
GATCACTGGC AGGCCGCCAT CGACCTTGGC TGCGATTTCA TCCATCTGGG ACAGGAGGAT
CTGGACGAGG CCGACATTCC TGCGATCCGC AAGGCGGGGT TGCGGCTGGG CATCTCGACC
CATGACCATG CCGAACTGGA CCGGGCGTTG GCGCTGCGGC CCGATTACGT CGCGCTGGGG
CCGGTCTGGC CGACGATCCT GAAGAAGATG AAATGGGAAC AACAAGGGCT GGACCGGGTG
CGCGAATGGC GCCGGCTGGT CGGCGCGACG CCCCTGGTTG CCATCGGCGG CGTGACCCCC
GAGCGCGCGC TGGAGGCATT CACCGCCGGC GCCGACGTCG CCTCGGCCGT GACCGACATC
ACGCTCAACC CCGACCCCGA GGGCCGCATC CGCGAATGGC TGCGGGTGGC GGCATGA
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| Protein sequence | MRLPRFYPIF DSSDWLRRAL PLGVKLVQIR IKDQPPARLL GELALCQELC REHGAMLVVN
DHWQAAIDLG CDFIHLGQED LDEADIPAIR KAGLRLGIST HDHAELDRAL ALRPDYVALG
PVWPTILKKM KWEQQGLDRV REWRRLVGAT PLVAIGGVTP ERALEAFTAG ADVASAVTDI
TLNPDPEGRI REWLRVAA
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