| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0020 |
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| Symbol | |
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| ID | 4578561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 16615 |
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| End bp | 18417 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639767331 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_913833 |
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| Protein GI | 119382777 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC TAATGAATGG CGCCTGCCTT GCGCTGCTCA TGTCCGGCAC TGCGGCGCTG
GCCAATGACA GCGTGCTGGC CGAGATCGCC AAGCCCCAGC AATGGGCGAT CCAGATGGGC
GATTACGCGA ACACGCGATA TTCGACCCTG GACCAGATCA ACAAGGACAA CGTCAAGGAT
CTGCGCGTCG CCTGGACCTT CTCGACCGGG GTGCTGCGCG GACACGAAGG CTCGCCGCTG
GTGATCGGCG ATGTCATGTA TGTCCACACC CCCTTTCCGA ACCGGGTGTT TGCGCTGGAC
CTGAACGACA ACGGCAAGAT CCTGTGGCGC TATGAACCGC AGCAGGATCC GAACGTCATT
GCGGTGATGT GCTGCGACAC GGTCTATCGC GGCCTTTCCT ATGCGGACGG CATGATCCTG
CTGGGCCAGG CCGACACCAC GGTCGTGGCC CTGGACGCCA CGAGCGGCGA GGTGAAATGG
TCGACCAAGA TCGGCGACCC GGGCATCGGC GAGACGCTGA CCGCCACCGT CGTTCCGGTC
AAGGACAAGG TCCTGGTCGG CATCTCGGGC GGCGAATACG GCGTGCGCGG CCGGATGACC
GCGCTGAACC TCACCGATGG CAGCGAGGCC TGGAAAGCCT GGTCCACCGG CCCGGACGAG
GAGTTGCTGG TCGATCCCGA AACGACCACG CATCTGGGCA AGCCCATCGG CGCCGACAGC
TCGCTCAACA GCTGGGAAGG CGATCAGTGG CAGATCGGCG GCGGCACGAT CTGGGGCTGG
TTCTCGTATG ACCCGGACCT GAACCTGGTC TATTACGGCA CCGGCAACCC CTCGACCTGG
AACCCCTCGC AGCGGCCGGG CGACAACAAG TGGTCGATGA CGATCATGGC GCGGGATGCC
GATACCGGCA TGGCCAAGTG GTTCTATCAG ATGACGCCCC ATGACGAATG GGACTATGAC
GGCGTCAACG AGATGATCCT GACCAACCAG ACCGTCGACG GGCAAGAGCG CAAGCTGCTG
ACCCATTTCG ACCGCAACGG CCTGGCCTAT ACGATGGATC GCGAGACCGG CGAGTTGCTG
GTGGCCGAGA AATACGATCC GGTGGTGAAC TGGACCACCG GCGTCGACAT GGACCCGAAT
TCGGAAACCT ATGGCCGTCC GGCCGTGGTG GCCGAATACT CGACCGCCCA GAACGGCGAG
GACGAGAACA CCACCGGCGT CTGCCCTGCG GCACTGGGCA CCAAGGACCA GCAGCCGGCG
GCCTTCTCGC CCAAGACCAA CCTGTTCTAT GTGCCGACGA ACCACGTCTG CATGGATTAC
GAGCCGTTCC GGGTGGCCTA TACCGCCGGC CAGCCCTATG TCGGCGCCAC GCTGTCCATG
TATCCCGCGC CGAACAGCCA TGGCGGCATG GGCAACTTCA TCGCCTGGGA CAACACCACG
GGCGAGATCA AGTGGTCCGT TCCCGAGCAG TTCTCGGTCT GGTCGGGCGC TTTGGCTACG
GCGGGCGACG TGGTCTTCTA CGGCACGTTG GAGGGCTATC TGAAGGCCGT CGATGCCCAG
ACGGGCGAGG AGCTTTACAA GTTCAAGACC CCCTCGGGCA TCATCGGCAA CGTGATGACC
TACGAACATG GCGGCAAGCA GTATGTCGGC ATCCTGTCGG GTGTCGGCGG CTGGGCCGGG
ATCGGCCTTG CCGCGGGCCT GACCAATCCC AACGATGGGC TTGGCGCGGT GGGCGGCTAT
GCCTCGCTGT CGCAATATAC CGAGCTGGGC GGCCAGCTGA CCGTGTTCGA ACTGCCGGGC
TAA
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| Protein sequence | MKNLMNGACL ALLMSGTAAL ANDSVLAEIA KPQQWAIQMG DYANTRYSTL DQINKDNVKD
LRVAWTFSTG VLRGHEGSPL VIGDVMYVHT PFPNRVFALD LNDNGKILWR YEPQQDPNVI
AVMCCDTVYR GLSYADGMIL LGQADTTVVA LDATSGEVKW STKIGDPGIG ETLTATVVPV
KDKVLVGISG GEYGVRGRMT ALNLTDGSEA WKAWSTGPDE ELLVDPETTT HLGKPIGADS
SLNSWEGDQW QIGGGTIWGW FSYDPDLNLV YYGTGNPSTW NPSQRPGDNK WSMTIMARDA
DTGMAKWFYQ MTPHDEWDYD GVNEMILTNQ TVDGQERKLL THFDRNGLAY TMDRETGELL
VAEKYDPVVN WTTGVDMDPN SETYGRPAVV AEYSTAQNGE DENTTGVCPA ALGTKDQQPA
AFSPKTNLFY VPTNHVCMDY EPFRVAYTAG QPYVGATLSM YPAPNSHGGM GNFIAWDNTT
GEIKWSVPEQ FSVWSGALAT AGDVVFYGTL EGYLKAVDAQ TGEELYKFKT PSGIIGNVMT
YEHGGKQYVG ILSGVGGWAG IGLAAGLTNP NDGLGAVGGY ASLSQYTELG GQLTVFELPG
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