Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_2414 |
Symbol | |
ID | 4036029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2971081 |
End bp | 2972967 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637974896 |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_581675 |
Protein GI | 93007238 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.752872 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCAAT ATAATGCGCA ATCGTTAGAA GTTTTAGAAG GTCTTGAGCC AGTCCGTCGT CGTCCAGGTA TGTACACCGA TACCACGCGC CCGAACCATT TGGCGCAAGA GGTCATTGAT AACTCGGTTG ATGAGGCGTT AGCGGGTTAT GCTAAAACCA TCAAAGTGCA ACTGCATAGT GATGGCTCGT TGTCTGTCGA AGATGATGGA CGCGGTATGC CAACAGATAT TCATCCTGAA TTTAACCAAT CAGGGATTGA GCTGATTTTA ACTCGTTTGC ATGCAGGTGG GAAATTTTCG ACTTCCAATT ATGAGGTGTC AGGTGGCTTG CATGGCGTGG GTATCTCTGT CGTCAATGCG CTATCAACGC GTGTTGAGGT TACGGTATGG CGTGATAGCA CACAGTTTGA TATGGCGTTT GAAAATGGTG CGCCCGTTAC GCCGTTGACC GAAGCGGTTA GCTCAAATAA GCGCAAACGC GGTACTAAAG TGCACTTTTG GGCAGATGGT AGTTTCTTTG ATACGCCAAA ATTTAATGTA AAGCAGCTCA AGCATAATTT GAAAGCCAAG GCGGTTTTGG CAGCTGGACT GACGATTGAA TTCACCGATG ATATTAATGA TGAAAAGGTG GTTTGGCAGT TTACTGATGG GGTGGTCGAG TATTTAAGCG AACAGTTAGA TGGTCTTGAG ACATTACCTG AAGCGCCATT CTATTATAAT TACGATGCTA AAGCGGGTGA ACGAGCTGCT ATTACCTTTG CATTGTCTTG GTTGCCTGAT GGTGGGACGC CAGTTCAAGA AAGTTATGTA AACCTGATTC CTACAGCTCA GGGCGGTACG CACGTCAATG GACTGCGCAC GGGTATCTTA GAAGCCTTGC GTGAGTTCTG CGATATCCAT AATTTACTAC CGCGTAGTGT AAAGCTAACC GCAGAAGATG TCTGGGATGG GGTGAACTAT ATCCTGTCTC TTAAGTTCTC TGAGCCGCAG TTTTCTGGAC AGACCAAAGA GCGCTTATCT AGCCGTGAGG CTGCAGGAGC CGTGCAGACA TTGGCAAAAG ATGCCTTTAG TCTTTGGCTA AACCAACATG CCGATATGGG TACGCAAATT GCCGAATTGG CAATTAGCAA AGCAGGACGT CGTTTAAAAT CGGCAAAAAA AGTCGCTCGT AAGAAAATCA CTCAGGGGCC AGCATTGCCC GGTAAATTGG CAGATTGCCG CGGTGATTTG CGTGATGGGG CTGAGCTGTT TTTGGTAGAA GGGGATTCTG CGGGTGGTAG TGCGAAGCAA GCACGTGATC GTCATTACCA AGCGATTCTA CCCTTGCGTG GTAAGATCTT AAATACGTGG GAGGTCTCAT CAGATACAGT GCTCTCGAGT CAAGAAATTC ATGATATTGC GATTGCCATT GGCGTTGATC CGGCATCTGA CGATTTATCT GAGCTACGTT ATGACAAGGT ATGCATCCTA GCGGATGCCG ATTCTGATGG ACTGCATATT GCTACCTTGA TCTGTGCGCT ATTCGTGAAG CACTTTCCTG CCTTAGTCGA TGCTGGTCAT TTATTTGTCG CAATGCCGCC ACTCTATCGC GTCGATGTGG CTAAAGAAGT GCATTATGCG TTAGATGAAA CCGAGCTTCA GCATATTTTA GCCAATGTAC CGGGCAATAA AAAAGCCCAA ATCACACGTT TTAAAGGCTT GGGTGAGATG AGTGCCGAGC AGCTGCGTGA AACGACCATG AACCGTGATA CACGCCGTCT AGTCCAATTG GATATGGATG ACATGGTACT AACCAACAGT GTGATGGATA TGCTGCTAGC CAAAAAGCGT GCTGCTGATC GTAAGATATG GCTAGAAGAT AAAGGTAATC TAGCCGATAT CTCATAG
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Protein sequence | MSQYNAQSLE VLEGLEPVRR RPGMYTDTTR PNHLAQEVID NSVDEALAGY AKTIKVQLHS DGSLSVEDDG RGMPTDIHPE FNQSGIELIL TRLHAGGKFS TSNYEVSGGL HGVGISVVNA LSTRVEVTVW RDSTQFDMAF ENGAPVTPLT EAVSSNKRKR GTKVHFWADG SFFDTPKFNV KQLKHNLKAK AVLAAGLTIE FTDDINDEKV VWQFTDGVVE YLSEQLDGLE TLPEAPFYYN YDAKAGERAA ITFALSWLPD GGTPVQESYV NLIPTAQGGT HVNGLRTGIL EALREFCDIH NLLPRSVKLT AEDVWDGVNY ILSLKFSEPQ FSGQTKERLS SREAAGAVQT LAKDAFSLWL NQHADMGTQI AELAISKAGR RLKSAKKVAR KKITQGPALP GKLADCRGDL RDGAELFLVE GDSAGGSAKQ ARDRHYQAIL PLRGKILNTW EVSSDTVLSS QEIHDIAIAI GVDPASDDLS ELRYDKVCIL ADADSDGLHI ATLICALFVK HFPALVDAGH LFVAMPPLYR VDVAKEVHYA LDETELQHIL ANVPGNKKAQ ITRFKGLGEM SAEQLRETTM NRDTRRLVQL DMDDMVLTNS VMDMLLAKKR AADRKIWLED KGNLADIS
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