| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2399 |
|---|
| Symbol | |
|---|
| ID | 4035008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 2949615 |
|---|
| End bp | 2952713 |
|---|
| Gene Length | 3099 bp |
|---|
| Protein Length | 1032 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637974881 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_581660 |
|---|
| Protein GI | 93007223 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.774253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.772443 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTAA ATGTTTCCGC CTACTCGATT AAAAATCCAT TAGTGGCTAT CTTGCTGTTT
GTACTGCTCA CCTTAGGCGG TATCTATGGC TTTATGCAAA TGAAGGTGCA ACAGTTTCCC
GATATTGACC TACCAGCGGT GGTGGTCACG GTTACTTTAC CGGGCGCTGC GCCATCGCAG
CTTGAAAACG ATATTGCAAA AAAGGTGGAA AATAAGCTCA CCAGTATTGA GGGCGTCAAG
CACATTCGTA CGACGCTCCA GACGGGCGCT GCCACTATGG TCGCTGAGTT CGTCTTAGAA
AAAGACATCC AAGAAGCGGT TGATGATGTG CGCTCGGCAG TCGGTGAGGT ACGTGGCGAT
TTGCCTGCCG CTGCCAATGA CCCTATCGTC ACCAAAGTCT CAACATCAGG ATTCCCAGTC
GTCACATACT CTGTCGCTGC TGAAAAAATG AATGTAGAAG ACTTGTCTTG GTTTGTCGAT
GATACCGTCA CCAAGCGTTT ATCTGATATA CCCGGTGTCA GTACTGTTAG CCGTATCGGC
GGTTTGCAGC GTGAAATTAC GGTTGCCGCT GACCCTATTA CCTTGAGTGG TCTAAAGCTT
TCTATCACGC AATTATCCAA TCAAATCACC GGTATTCAGC AAGACAGCTC AGGCGGTGAA
GCCGAAGTCG GCAAAACCAC GCAGACCATT CGTGTACTTG GTGCTGTTGA GCGTGCAAGC
GATTTAAATA ACTTACAAGT TGCAGTGCCT ACGGGCGGTA CGCAAGCGCT TGGACGCATG
GCACAAATTA CGGATGGCGC GGCTGATCCA AGCTCTATTG CCAAGCTCGA TGGGCAAACG
GTGGTTGCAT TCAATATTAC GCGCTCGCGT GGTGCCAGTG AAGTGGAAGT CATGGAGCTG
GTTGACGCTG AGCTTACTAA GCTGTCAGCA GATGTGGGCA ATATTAGTAT TGAAAAGGTT
TATGATCGAG CAACGCCAGT CGCTGAAGAT TATCAAGCGT CATTACGGAT GCTGATAGAA
GGTGGTTTGC TTGCCGTAGT CGTGGTGTTC TTATTTTTAC GCAATATCCG CGCGACTTTT
GTGGCTGCTG TGGCATTGCC ATTGTCCGTC ATACCTACTT TTTTGGGTAT GTATCTGTTT
GGTTTTAGTC TTAATATTAT CTCCTTATTG GCGCTGTCGC TGGTCATTGG TGTACTGGTC
GACGATGCCA TTGTAGAAGT TGAAAATATT ATTCGTCATT TGCGTATGGG TAAGACGCCT
TATGAGGCGG CAATGGAAGC GGCGGATGAA ATTGGTTTGG CGGTTGTTGC CACTACCTTC
ACCTTGATTG CCGTATTTTT ACCGACTGCG TTTATGGGCG GAATTGTCGG GCAGTTTTTT
CGGCAGTTTG GTTGGACAGC AGCATTATCA ATATTTGCCT CGTTAATGGT TGCGCGCCTT
ATCACACCGA TGATGGCAGC ATATATATTG AAACCAGAAA AGAAGCACGT TGAAAAGCAG
AGCGCGCTGA TGGATTGGTA TCTTAAAGTG GTCTCATGGA CGCTAGATCA TCGCTGGATG
ACGATGGGTG CTACCTTAGT ATTGTTTGTG GCTTCATTGG GTTTGGTAAA ATTATTACCC
ACCTCTTTTA TACCTGATAA TGATATTGAC CAAACACGGG TGGCGATTGA GCTGACACCC
GATGTGGCGT TAGCGGACAC GGAACGAGTT GCCGCGCTGG CAAGTGAGCG TATTTTAGCC
ATGCCTGAAG TGACCAATAT CTTTACATCG GTAGGTGAGG CGCAGGCGAC AATGGACTCA
AACTCTAGCG GTGGCAAGGC AGAAAATATA GCAGGTCTAG ATATTGTACT TGCGCCAAGA
GCAGAGCGCG GCTCTAAGCA AGAGATTGAG CGTAAGATGA GTACTATATT GGCAGAAATA
CCCGGTGCGC GCTTTACGGT CGGGTTATCG AGTGGTGGTG AGACAGGTTA TAATTTTTCT
TTGACCAGCA CCGACCCGCA ACTGCTTGAG CAAACCGTAC AGCAGATGAT GTCAGAGATC
CGTGAGCTAC CAAGTTCTGG TGCTGTCACG AGTGATCGCA GCCTGCCACG CCAAGAGTTG
ACCGTCACGC CAAATAGGCT AGCAATGGCG GATAAAGGGG TGACGACGCA AGATATCGCC
ACGACCTTAC GTGTGGCGAC CGTTGGTGAC TATGAGCAAC GTTTGTCCAA GCTGAATTTA
GATACGCGGC AGATACCAAT TGTCGTGCGC TTGCCAGATA TCGCTAAGCA AAACGTCAGC
CAACTCGAAG GCTTATATGT ACCAAGTGCG CTACCAGCAG GACAAGGCGT GCGTGTTGGC
GAAGTTGCGA CACTCGACTT TGGTACTGGA CCTGCGCAAA TCAGTCGCCT TGATCGTGAG
CGTGCGATTA GTATTACTGT TCAGCCTGCC AATGGTGAGC TTGGTGATCT GGTACAAGCG
GTCAAGAGTA TACCTAGTAT GCAACAGCTT CCAGCCTCTA TTACTATTAT TGATCAAGGA
CAAGCAGAAA ATATGGCCGA GTTATTTAGC GGCTTTGTGA TTGCAATGTC GGTCGGCGTG
GTCTGTATTT TGGGCGTACT TATATTATTA TTTGGACGCA TCTTGCAGCC ATTTACGATT
CTCATGGCAT TGCCCCTGTC TATCGGTGGT GCCTTTGTAG GCTTGGTAAT TACCAATAGC
AGCCTGTCGA TGCCCTCGAT GATTGGTTTT ATTATGTTGA TGGGCATTGC GACCAAAAAC
TCTATTCTTT TGGTCGATTA TGCACTGATT GCTCAGCGGC GCGGTCTAGC ACGTTTTGAG
GCAATTATCG ATGCTTGTCG TAAGCGTGCG CGTCCGATTA TTATGACCAC TATCGCGATG
GGCGCTGGTA TGTTGCCGTT GGTATTTGGT TGGGGTGATG CCGATCCGAC CTTCCGTCGA
CCGATGGCAG CAGCAGTATT GGGAGGTTTA GTCACCTCAA CCTTATTAAG CCTCGTTGTT
ATTCCAGTGG TCTATACCTT GATGGATGAC TTATCAGGAT GGTTTGGTAA GTGGCTTGCT
CCGAATGGTA AGCCAGATAT AATGACTGAG GAAAAGTAG
|
|---|
| Protein sequence | MSLNVSAYSI KNPLVAILLF VLLTLGGIYG FMQMKVQQFP DIDLPAVVVT VTLPGAAPSQ
LENDIAKKVE NKLTSIEGVK HIRTTLQTGA ATMVAEFVLE KDIQEAVDDV RSAVGEVRGD
LPAAANDPIV TKVSTSGFPV VTYSVAAEKM NVEDLSWFVD DTVTKRLSDI PGVSTVSRIG
GLQREITVAA DPITLSGLKL SITQLSNQIT GIQQDSSGGE AEVGKTTQTI RVLGAVERAS
DLNNLQVAVP TGGTQALGRM AQITDGAADP SSIAKLDGQT VVAFNITRSR GASEVEVMEL
VDAELTKLSA DVGNISIEKV YDRATPVAED YQASLRMLIE GGLLAVVVVF LFLRNIRATF
VAAVALPLSV IPTFLGMYLF GFSLNIISLL ALSLVIGVLV DDAIVEVENI IRHLRMGKTP
YEAAMEAADE IGLAVVATTF TLIAVFLPTA FMGGIVGQFF RQFGWTAALS IFASLMVARL
ITPMMAAYIL KPEKKHVEKQ SALMDWYLKV VSWTLDHRWM TMGATLVLFV ASLGLVKLLP
TSFIPDNDID QTRVAIELTP DVALADTERV AALASERILA MPEVTNIFTS VGEAQATMDS
NSSGGKAENI AGLDIVLAPR AERGSKQEIE RKMSTILAEI PGARFTVGLS SGGETGYNFS
LTSTDPQLLE QTVQQMMSEI RELPSSGAVT SDRSLPRQEL TVTPNRLAMA DKGVTTQDIA
TTLRVATVGD YEQRLSKLNL DTRQIPIVVR LPDIAKQNVS QLEGLYVPSA LPAGQGVRVG
EVATLDFGTG PAQISRLDRE RAISITVQPA NGELGDLVQA VKSIPSMQQL PASITIIDQG
QAENMAELFS GFVIAMSVGV VCILGVLILL FGRILQPFTI LMALPLSIGG AFVGLVITNS
SLSMPSMIGF IMLMGIATKN SILLVDYALI AQRRGLARFE AIIDACRKRA RPIIMTTIAM
GAGMLPLVFG WGDADPTFRR PMAAAVLGGL VTSTLLSLVV IPVVYTLMDD LSGWFGKWLA
PNGKPDIMTE EK
|
|---|
| |