Gene Pcryo_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2198 
Symbol 
ID4035025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2701985 
End bp2702503 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content41% 
IMG OID637974672 
Producthypothetical protein 
Protein accessionYP_581459 
Protein GI93007022 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00219221 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00807275 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATGTGCT ATGATAATTC TGAAATGTTG AGCAGACTGA TAGACGTCAT GGCAAATGAT 
AAACCTTTAA TGCTAACCTC TCCAAAACAG CGCCAAGGTA GCCGATTTGA GCAGCGGGCG
TGTGAGTTTT TGCAAGAGCG AGGGTTGATT TTGGTTGCGC AAAACTGGCA GCAGCCTAAA
GTTGGCGAGC TTGATTTAGT GATGTTAGAA AAAGGACAAG CATGGTCGAC ACTGGTATTT
GTGGAAGTAC GGCAAAGACA GCACTCATAT TTTGGTGATG CGGCTATCAG CGTCACAGCA
GGCAAGCAAC GTAAAATTAT CAAAGCAGCG CGTCATTTTT TACAGCAAAA CCCTCAATAT
CATAAATATG AATGTCGGTT TGATGTGATT GCTTATAATA CAATGAATAA AAAAAATAAA
AATGAAGCCA ATATCACGTT GGACAATCAA CCAAATCAAC GGTTAGAAAT TAATCAGCCT
GAATGGCTAC AAGGCGCATT TATCACGTCA GCTTGGTAA
 
Protein sequence
MMCYDNSEML SRLIDVMAND KPLMLTSPKQ RQGSRFEQRA CEFLQERGLI LVAQNWQQPK 
VGELDLVMLE KGQAWSTLVF VEVRQRQHSY FGDAAISVTA GKQRKIIKAA RHFLQQNPQY
HKYECRFDVI AYNTMNKKNK NEANITLDNQ PNQRLEINQP EWLQGAFITS AW