| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2116 |
|---|
| Symbol | |
|---|
| ID | 4035606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 2589573 |
|---|
| End bp | 2590490 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637974589 |
|---|
| Product | histone deacetylase superfamily protein |
|---|
| Protein accession | YP_581377 |
|---|
| Protein GI | 93006940 |
|---|
| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAA TTGCCTACTC TGATATTTTT CGTTATTCAG TACCCGAAAA ACATCGTTTT
CCGATGCAAA AATACACTAT GATTCCTGAG CGCTTATTAG CGGAAAAGAC TATTAGTGCG
AATAACTTTT TTGCGCCCAC ACGCTTAAGC GAAGATGAAA TCTTAACGAC GCATACTGCT
GATTATTGGT ATCAGCTTAA GACCCAAACG CTACCAAGAA AAGAAGCGCG AGCGATCGGC
TTTGAGATGA CGCCTGAGTT AGTAGAGCGT GGGCGCTATA TTGCCCATGC GACTTATGAA
TGTGCGCTTT ATGCTCAGCA ATATGGCGTG GCGATGAATG TTGCCGGCGG TACGCACCAT
GCGTTTTCTG ATCATGGCGA GGGCTTTTGC GTGTTTAATG ATGTCTGTAT TGCGAGTAAT
TTATTATTAA ATCGTGGACA GGCGCAAAAG ATTTTGGTGG TCGATTTGGA TGTGCATCAA
GGCAACGGCA ATGCCAGTAT CATGGCGAAT GAGCCACGCG TTTTTATCTT TAGTATGCAT
GGCGCAAAGA ACTATCCGTT TCGTAAACAA GTATCAGACT TAGATATTGA GCTAGATAAC
GATACTGGTG ATGAGCAATA TTTACAGATA TTAGAAGACA CGCTACCGCG CTTAATTAGC
GACGTTGCAC CAGATATGAT CTTTTATCAG TCTGCTGTCG ATGTACTGGC GACCGATAAG
TTGGGAAAAC TTGGGCTGAC GATAGAAGGT TGTAAGGCGC GTGATGAATA TGTGTTACGC
CAAGCAAAAG CCGCTAAAAT TCCTATCGCT ATCGTGATGG GTGGCGGCTA TTCAGAAGAT
ATTGAAGATG TGGTTGAAGC GCACTGCAAT ACGTTTCGTT TGGCGCAACA GATATTTTTT
GATGAAATAA CAGAATAA
|
|---|
| Protein sequence | MLKIAYSDIF RYSVPEKHRF PMQKYTMIPE RLLAEKTISA NNFFAPTRLS EDEILTTHTA
DYWYQLKTQT LPRKEARAIG FEMTPELVER GRYIAHATYE CALYAQQYGV AMNVAGGTHH
AFSDHGEGFC VFNDVCIASN LLLNRGQAQK ILVVDLDVHQ GNGNASIMAN EPRVFIFSMH
GAKNYPFRKQ VSDLDIELDN DTGDEQYLQI LEDTLPRLIS DVAPDMIFYQ SAVDVLATDK
LGKLGLTIEG CKARDEYVLR QAKAAKIPIA IVMGGGYSED IEDVVEAHCN TFRLAQQIFF
DEITE
|
|---|
| |