| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1759 |
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| Symbol | |
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| ID | 4034169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 2177288 |
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| End bp | 2179090 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637974227 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_581020 |
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| Protein GI | 93006583 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000901075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0327712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTAC GTTATTTTGT TACCCCCAAC TCAGTAACTA AGGCAGTCTC TTTGACTGCC
CGCGTTCGCC AAAATAGTGG ACGTTTAATA GGTCTAACAG CCTTAGCGAT GAGCATGGCG
GCTTGTAATA CCATTCCAAA GGCTGATACA CGTCCTGTAT TGGCGGTGCC TAATATTCCG
ATCGAACAAA CCTATGGCGC GTTTGATAAA GAGACCGTTA GTAGCGCTGA GCAAGCCAGT
CTTGCTAGTC AACGCTGGCA GAACTTTTAC AGCGATGAGC GTTTAAAGGG TCTGATTGCT
CTAGGTTTAG AGAACAATAA AGACTTTGAA AGTGCTCGTT TAGCGATTGA AAAAGCCCGT
GCACAATATC AAATTACTGA TATCAATGAT CTACCTCGCA TTGATGGTAA TGCTGGCTAT
TCGCGCACGC GTCAACGCGG ACAAACAGGC GATAACTATA ATGTTAACCT TGGTCTTGCC
AATTATGAGC TCGACTTTTG GGGTAAAATT GCCAGCTTAA AAGATCAAGC GTTGCAGAAC
TTTTTATCAA CGACAGCGGC AAAAGACGCG ACCCAGATCA GTCTGATTAG CAACATTGCT
CAAAGCTATG CCAATTTGAG CTATAGCTTG GCGCAGCTAC AACTGGCAGA GGCGACTGTA
GAGAGCCGTG AGAAATCGCT ATTTATTGCT AGCAAACGCT TTGAAGCTGG TATTGATCCT
AAGCTGCCCT CTTTGCAATC TAGCGCCTCA CTTGAAAATG CCCGACTTGC CGTTTTACGT
GCCCAAAGCA GTATTTTAAA ATCACGTAAT GCATTGCAGT TTTTAGTTGG TGGACCGATT
CCAACCAATC TGATTCCAAC GCCTGCGGTC AGTAATATCA CAAGTCAGCA AGTATTTAGT
GCTGGCTTGC CAAGTGAGCT GCTACGCTAT CGTCCTGATG TGTTGCAAGC AGAATATAAT
CTGAAAGCAG CTGGTGCGAA TATCGAAGTG GCGCGCGCGT CTTATTACCC CTCTATCAGC
TTGGCCAGTA ATATTGGCTT AAGCAGCGGC AGTTTAAATG ACCTGTTTAA AAGTGGTTCT
GTCGGCTGGT CATTCGGTCC AAGCGTTAGT GTGCCTATCT TTGATGCTGG TCGCTTAGAT
GCCAACTATG ATGTGGCACA AATCGAGCGT AAGCAGACGC TTGCAGGCTA TGAGCGCTCA
ATTCAAACCG CTTTCCGTGA AGTGTCGGAT GTCTTAGCCA CCCGTGCAAC TTTGGGCGAG
CAGTTAGAGG GGCAGTATCG TTTGCAAGAC AACTTTGAGC AAACGTATCA GATTGCTGAT
GCGCGCTTTA AAGCAGGTAT CTCAAACTAC CTAGACGTCC TTGATGCTCA GCGTTCGTTA
TTTTCAACGC AACAAGGCAT TTTGGATTTA GAGCTACAGA AAATCATCAG TCAAGTTGAG
CTTTATCAAG TGTTGGGTGG CGGTGCCAAT CTAGATGTAC CAACCGTGAT TCCTGTACCG
CACCATAGAA ATCTGGTACA AGTAGTCAAT GCAGCTGCCA ATAGTAACAA GGCAAAAGCT
ACTGATGCTA TCGATGCGGC AAGTTCTGCA CGTGTGGTTT CTGCTCAAGA AGCCCTCGCC
ATTAAACAGG CACAGCCAGT AGAAAAATCG ACCTTTAAGC CAACGGCTGT GGTCGATGTC
AATAACGATG GCAAGACTGA TGCTGCTCTC GGGGTGATTA CTGAAGAAAC CATCTCAAAA
GAGACTCGCA TTAAAGAAGT CAGTGTTGAG CAAGTACCAG TCACGCAGAT TATTGAGCCA
TAA
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| Protein sequence | MSLRYFVTPN SVTKAVSLTA RVRQNSGRLI GLTALAMSMA ACNTIPKADT RPVLAVPNIP
IEQTYGAFDK ETVSSAEQAS LASQRWQNFY SDERLKGLIA LGLENNKDFE SARLAIEKAR
AQYQITDIND LPRIDGNAGY SRTRQRGQTG DNYNVNLGLA NYELDFWGKI ASLKDQALQN
FLSTTAAKDA TQISLISNIA QSYANLSYSL AQLQLAEATV ESREKSLFIA SKRFEAGIDP
KLPSLQSSAS LENARLAVLR AQSSILKSRN ALQFLVGGPI PTNLIPTPAV SNITSQQVFS
AGLPSELLRY RPDVLQAEYN LKAAGANIEV ARASYYPSIS LASNIGLSSG SLNDLFKSGS
VGWSFGPSVS VPIFDAGRLD ANYDVAQIER KQTLAGYERS IQTAFREVSD VLATRATLGE
QLEGQYRLQD NFEQTYQIAD ARFKAGISNY LDVLDAQRSL FSTQQGILDL ELQKIISQVE
LYQVLGGGAN LDVPTVIPVP HHRNLVQVVN AAANSNKAKA TDAIDAASSA RVVSAQEALA
IKQAQPVEKS TFKPTAVVDV NNDGKTDAAL GVITEETISK ETRIKEVSVE QVPVTQIIEP
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