| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1758 |
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| Symbol | |
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| ID | 4034168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 2173989 |
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| End bp | 2177291 |
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| Gene Length | 3303 bp |
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| Protein Length | 1100 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637974226 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_581019 |
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| Protein GI | 93006582 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.04251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGTT TTTTTATTGA TCGCCCTATT TTTGCATGGG TGATGGCTAT TTTAGTCATG
CTTATCGGGA TAATATCGGT TATTAACCTA CCGATCGAGC AGTATCCACG TATTGCACCA
CCGACCATCT CAGTCAGTGC CAGCTATCCT GGTGCTAACG CACAAACTGT CGAGAACTCA
GTCATACAGA TCATTGAACA ACGTATGAAG GGTCTTGATG GTCTGATGTA TATGTCGTCA
TCGAGCTCGT CAAATGGTAG CGCCTCAGTG ACGCTTACCT TTGAGAATGG TACTGATTCT
GATACCGCAC AAGTACAAGT ACAGAACAAA CTGCAAGCAG CGATGAGCTC CTTGCCTGAG
TCTGTTCAGC GTCAAGGCGT CAACGTCAAT AAATCGTCTA GCAGCTTTTT GATGGTGCAA
GCATTTATTT CTGAAGATGG CACTATGGAT CGAGCGGATA TTGCCGATTA CATTAACTCC
AATGTCGTCG ATTCGATCAG TCGTGTAGAG GGTGTGGGGG AAGTTCAAGT CTTCGGTTCT
ACCTATGCGA TGCGTGTATG GCTTGACCCT TCACGCCTAC GCAGCTATAA CATGGTACCG
TCTGATGTCG TCAATGCAAT ACGAGCGCAG AACGCGCAAG TATCTGCTGG TCAGCTAGGT
CAAGCACCTG CTGATACCGA TCAACAGGTT ATCAATGCCA CCGTTACAGT GCAAAGCTAT
CTACAAACAC CTGAAGAATT CCAAAATATT CTGTTAAAAA CAGATACCTC AGGCGCCCAA
GTACGCTTAG GCGATGTGGC AGATGTCGAA ATTGGTAGTG CAGACTATAG TGTAGTATCG
CTATATAACG GTCAAGAAGC TGCCGCTTTG GGTATTTCAC TCGCAGGTGG TGCTAACGCG
CTTGAGACTC GTGAAGCCGT TGGCGCACGT ATGGCGGAGC TAGAAAAAAA CTTCCCAATT
GGTCTAGTCT CAGTCGTTCC TTATGACACC ACGCCATTCG TACGCTTGTC TATCGAACAA
GTCGTCATGA CCCTCATTGA GGCGATTGTG TTGGTATTTA TCGTCATGTT CATTTTCTTA
CAGAACTGGC GTGCAACTAT TATTCCGACG CTTGCCGTAC CTGTCGTTTT ACTGGGCACG
TTCGCAGTGC TTTATGTAGC GGGCTTTAGT ATCAACGTGC TGACCATGTT TGCGATGGTA
CTGTCCATCG GTCTACTGGT CGATGATGCG ATCGTTGTGG TAGAGAACGT TGAACGTATC
TTAGAAGAAG ATCCTCATAT TTCTATTAAA GACGCGACCA TTCAATCGAT GGGTGAGATT
AGTAAGATTG TTATCGGTAT TGCTTTGATT CTATCAGCAG TATTTGTACC GATGGCCTTC
TTCGGGGGTT CAACGGGCGT AATTTACCGT CAGTTCTCCA TTACTTTGAT TACTGCTATG
GTGTTATCAG CCATTGTCGC CCTTGTTTTC ACCCCTGCGC TATGCGTGAC CTTATTAAAA
CGTGGCAAGA GCCATGAAAA AGGCAACGAA GAAAAGCAAA AAGGCTTCTT TGGCTGGTTT
AACCGCTCAT TCTTTAAGCT TAGTCGTTCA TACGAAGGCT TTGTCGGTAA AAGCTTTCGC
TTCAAATGGT TATATTTGAT TGGTTATGCG GCCATTATTG GCGTCATGGT GGTGGTATTC
TTACGTATTC CCGGCTCATT TTTACCAGAA GAAGATCAAG GTATTATGTT TACCTTGGTT
CAGCTTCCTG CCGGTTCGAC GTTAGATGAA ACACAAGAAG TGCTCGATAA AGTGAGTAAC
TATTACACCA CACAAGAAGC TGATAATATC GCCTCCGTCT TTACAATTGC AGGCTTCAGC
TTTGCAGGTC AAGGGCAAAA TATGGGACTG GCATTCGTTC GCTTGTCAGA TTGGGAAGCG
CGTTCCGGTG ATGAGAACAC TGCTCAGGCT GTTGCTGGTC GAGCAATGGG TTACTTCTTT
ACCCAATTAA ATGAAGCGCA AGTTTTTGCG ATTGTACCGC CAGCCATTAC CGAACTTGGT
AACGCCAGTG GTTTTGATTT AATGATTCAA GATAATGGTA ACCTTGGTCA CGACGGGCTA
CTTGAAGCAC GAAACATGCT GCTAGGCATG GCAGCGCAAA ACGATCAAGT CGCTGGTGTA
CGCCCTAACG GTCAGGAAGA CTCACCGCAG CTTAAGGTGA ATATCAACCA AGAGCAAGCC
GCCGCTTATG GCTTGTCACT AGGTAATATC AATAGCGTTA TCTCCACCGC TTGGGGCTCA
AGCTACGTGA ATGACTTCAT TGATCGTGGC CGTATTAAAC GCGTCTTTGT TCAAGGTGAA
GCGAGTAGCC GCACCAATCC GGATGATATT GGTAAATGGT ACGTACGAAA TGAAATGGGC
GATATGATCT CATTTAATGC TTTTTCGACC AGTGAATGGC AATCAGGCTC ACCACGTCTG
ACCCGCTACA ACAGCTTACC GTCTATGAAC ATCCAAGGCA GTGCTGCGCC CGGTCTAAGT
ACTGGTGAAG CGATGAGCTC GATGGAAGCG ATGATCGAAA AGCTACCTGA AGGTATCGGT
TACGAGTGGA CAGGTATGTC ACTAGAAGAG CAAAAGTCAG GCGCTCAAGC ACCGATGCTC
TACGCACTTT CAATCTTAGT CGTGTTCTTA TGTTTGGCAG CCCTCTATGA AAGCTGGTCT
ATTCCCTTCT CTGTCCTACT GGTCATTCCA CTTGGGGTAT TAGGGGCAGT CATATTTACG
TGGTTACGAG GTTTCGCCAA CGATATTTAC CTACAAGTAG GTCTGCTTAC CGTCGTAGGT
CTATCGGCCA AAAACGCCAT CTTGATTATC GAGTTTGCTA AAGAGCATCA AGAGGAAGGC
TATAGTCTAA AAGAGGCCGT CATGACAGCA GCACGCCAAC GTATGCGCCC CATTATCATG
ACCTCACTTG CCTTTGGTCT AGGTGTTGTG CCATTGTTCT TGGCGAGCGG TCCAGGTTCA
GGCAGTCAAA ATGCCATTGG TACCAGTGTG GTCGGTGGTG TTGTCTCTGC AACATTACTA
GGCATCTTCT TTATTCCGAT GTTCTATATC TGGATACGCA GTGTGTTCCC TCACAAGTAT
GAGAACAACA AGCCAAATAA TGGTGGCAGT ACGCCTGGCG GCTCTAACCC TGATAATCCA
GACAGTCCTG CTGGACCAAC AGAGTATAAT GAACCACCGA TCACACACGT TGACGACGAT
ATGCAAAACA TGACGCTTTC TAAGAGCGCT CAGTCTGCAA GCTTTGGAGA TAATACACAA
TGA
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| Protein sequence | MSRFFIDRPI FAWVMAILVM LIGIISVINL PIEQYPRIAP PTISVSASYP GANAQTVENS
VIQIIEQRMK GLDGLMYMSS SSSSNGSASV TLTFENGTDS DTAQVQVQNK LQAAMSSLPE
SVQRQGVNVN KSSSSFLMVQ AFISEDGTMD RADIADYINS NVVDSISRVE GVGEVQVFGS
TYAMRVWLDP SRLRSYNMVP SDVVNAIRAQ NAQVSAGQLG QAPADTDQQV INATVTVQSY
LQTPEEFQNI LLKTDTSGAQ VRLGDVADVE IGSADYSVVS LYNGQEAAAL GISLAGGANA
LETREAVGAR MAELEKNFPI GLVSVVPYDT TPFVRLSIEQ VVMTLIEAIV LVFIVMFIFL
QNWRATIIPT LAVPVVLLGT FAVLYVAGFS INVLTMFAMV LSIGLLVDDA IVVVENVERI
LEEDPHISIK DATIQSMGEI SKIVIGIALI LSAVFVPMAF FGGSTGVIYR QFSITLITAM
VLSAIVALVF TPALCVTLLK RGKSHEKGNE EKQKGFFGWF NRSFFKLSRS YEGFVGKSFR
FKWLYLIGYA AIIGVMVVVF LRIPGSFLPE EDQGIMFTLV QLPAGSTLDE TQEVLDKVSN
YYTTQEADNI ASVFTIAGFS FAGQGQNMGL AFVRLSDWEA RSGDENTAQA VAGRAMGYFF
TQLNEAQVFA IVPPAITELG NASGFDLMIQ DNGNLGHDGL LEARNMLLGM AAQNDQVAGV
RPNGQEDSPQ LKVNINQEQA AAYGLSLGNI NSVISTAWGS SYVNDFIDRG RIKRVFVQGE
ASSRTNPDDI GKWYVRNEMG DMISFNAFST SEWQSGSPRL TRYNSLPSMN IQGSAAPGLS
TGEAMSSMEA MIEKLPEGIG YEWTGMSLEE QKSGAQAPML YALSILVVFL CLAALYESWS
IPFSVLLVIP LGVLGAVIFT WLRGFANDIY LQVGLLTVVG LSAKNAILII EFAKEHQEEG
YSLKEAVMTA ARQRMRPIIM TSLAFGLGVV PLFLASGPGS GSQNAIGTSV VGGVVSATLL
GIFFIPMFYI WIRSVFPHKY ENNKPNNGGS TPGGSNPDNP DSPAGPTEYN EPPITHVDDD
MQNMTLSKSA QSASFGDNTQ
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