Gene Pcryo_1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1752 
Symbol 
ID4035253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2168058 
End bp2168618 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content42% 
IMG OID637974220 
Productputative transcriptional regulator 
Protein accessionYP_581013 
Protein GI93006576 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.178756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0679167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA TAGACGACCC TAAAGACCAC CTACTATCTA TTGAAGACAT AAGTAAACAG 
ATTGAAGTTT TACTTCATGC TTCAGAAGCA CCCTTAACTA CTAATCACTT AAAAAAACAC
TTATTCTTAA CGACTAATAA GTTAGAGCAG GCACTAGAAC TGCTAAAGCA ACGCTTAAAT
CTTGGCGTAT TAAGTTTGCA TCATACTGCC AGTGGTTATC GTTTGCAAAT CGCTGATAGC
CATAGCGCCT TAATACAGAA TGTCTTTCCC CAGCGTCAAG AACGTCTCAG CCAAGCCTTG
CTAGAGACTT TGAGCGTGAT TGCTTACAAG CAACCGGTGA CACGTAGCGA TATAGAACAT
GTGCGCGGCG TGACGCTATC GAGCAATATA TTGCGTCAAT TGTTTGATAA AGGCTGGATT
GAAGAAAATG GTTACAAAGA TACTTTAGGG CGTCCGGCAT TACTGCATAC TACGTCTCAA
TTCTTAGATG CTTTTGGACT GAGCCATTTA GATGAGCTAC CGCCCATGCC AGAGATAGAC
AGTATCAGAG CATCCTCTTA A
 
Protein sequence
MADIDDPKDH LLSIEDISKQ IEVLLHASEA PLTTNHLKKH LFLTTNKLEQ ALELLKQRLN 
LGVLSLHHTA SGYRLQIADS HSALIQNVFP QRQERLSQAL LETLSVIAYK QPVTRSDIEH
VRGVTLSSNI LRQLFDKGWI EENGYKDTLG RPALLHTTSQ FLDAFGLSHL DELPPMPEID
SIRASS