Gene Pcryo_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1726 
Symbol 
ID4034724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2137477 
End bp2138595 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content49% 
IMG OID637974192 
ProductABC transporter related 
Protein accessionYP_580987 
Protein GI93006550 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.350865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGGCT ATGACGACAC CATAGTAGTC AATGGTTTGT CACTGAACCT ACAGCAAGGT 
GAAATTGGTT GCTTTTTAGG TTATAGCGGC TGTGGTAAGA CCACGGCATT AAGAGCGATT
GCAGGGTTAG AAGAGAGTCG TAGCGGCAAA ATCACGCTTA ACAATCAGCG ACTAACAGAG
CAAGCGGCGC GTGTCTCATT TGCCGTTGCA CCTGCCAAGC GCGGCATGGG GATGGTATTT
CAAGACTATG CGCTATTTGG TCATTTAAGC GTGGCAAAAA ATATCGGCTT TGGTCTCAAT
AAATGGTCGG CTGCCGACAA AAAAGCCCGT GTTGCTGAGA TGCTAGCGCT GGTAGAATTG
TCTGAACATG CCGATAAACG CCCAAGCGAG CTCTCAGGTG GACAGCAGCA GCGGGTGGCA
TTGGCTCGTG CATTGGCACC GAAGCCTAAG TTATTACTGC TCGATGAGCC GTTTTCGAAC
TTGGATGTAG TACTGCGTGA ATCATTAGCT ATGAATGTCC GCGATATTCT AAAGCGCACC
AATACCACTG CGATTTTGGT CACTCATGAT CAAAATGAAG CGTTTGCGCT CGCTGATAAA
GTCGGCGTCA TGCATAAAGG TAAGCTGGTA CAGTGGGCAA CCCCAAGTGA GCTATATCAT
GAGCCGGTCA GCCCATTCGT CGCTGAGTTC GTCGGTGAAG GCGCGATGAT AGACGGCATC
ATCAAAGAAG GTCATGTCGA GACGGCGCTT GGTGATATTT ATCGGCGGAT GGAAGTCTAT
GATGCGTCCG GTCAGCCGCA GTATTGTGAA TACGACTATC CGAATGGTAC GCCGATTAAG
GTATTGGTGC GTCCCGATGA CATTATCCAT GATGATGACA GTACGCAGAC CGCCTTAGTG
GTTGGTCGGG TATTTCGCGG TGCCAATTAT CTCTATCGCT TGCAACTAGA TGATGGTCAA
ACGGTATTGT CATTGGTCGC CAGTCATCAT AATCATGAAG TCGGCACCCA AATCGGTATC
TTGCCGATAC TGGAGCATGT GGTGGTATTT GACGAAAAGG ATATCAACGC TACCACGTGG
TCAGAGTATG ATAGGTCAGA GCGGTTTGAG GACATATGA
 
Protein sequence
MVGYDDTIVV NGLSLNLQQG EIGCFLGYSG CGKTTALRAI AGLEESRSGK ITLNNQRLTE 
QAARVSFAVA PAKRGMGMVF QDYALFGHLS VAKNIGFGLN KWSAADKKAR VAEMLALVEL
SEHADKRPSE LSGGQQQRVA LARALAPKPK LLLLDEPFSN LDVVLRESLA MNVRDILKRT
NTTAILVTHD QNEAFALADK VGVMHKGKLV QWATPSELYH EPVSPFVAEF VGEGAMIDGI
IKEGHVETAL GDIYRRMEVY DASGQPQYCE YDYPNGTPIK VLVRPDDIIH DDDSTQTALV
VGRVFRGANY LYRLQLDDGQ TVLSLVASHH NHEVGTQIGI LPILEHVVVF DEKDINATTW
SEYDRSERFE DI