Gene Pcryo_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1670 
Symbol 
ID4034569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2056590 
End bp2057288 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content43% 
IMG OID637974135 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_580931 
Protein GI93006494 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0087165 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.167028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACG CAATTAATTC TCCTGTCATC GTTGCATTAG ATAATATGAC AAAGGATGCC 
TCTCTTGCAT TAGCTGACCA ATTAGATCCG GCATTATGCC GATTGAAAGT AGGTAAAGAG
CTGTATACCC GCTATGGCCC TGAGATAGTC AAAGCACTGC ATCAGCGCCA ATTTGAGGTT
TTTTTAGACC TTAAATTTCA CGATATCCCC AATACCACTG CACAAGCAGT ATTGGCTGCC
GCTGAGCTTG GTATATGGAT GGTCAACGTC CATGCAAGTG CCGGTTACGA TGCGATGTCA
TTGGCAAAAC AGCGCTTGCT AGATAATGAT TTTGACACGC TATTGATAGC AGTGACTGTC
TTAACATCTA TGGACAATGA AGCACTCATA CAAACGGGCA TCACCGACGG CTTAGAGGCA
CAAGTGAGCC GCTTAGCACA ATTAACCAAG CAAGCATGTC TTGATGGTGT AGTATGCTCA
GCACAAGAAG CAAAGGCATT AAAGGCATTA TGTGGTCAGG ACTTTAAACT GATTACGCCT
GGTATCCGTC TGCTAGATGA TAATGCTGAT GATCAAAAGC GTATTTGTAC GCCAAAACAG
GCATTACTTG ATGGCTCTGA TTATTTGGTG ATAGGGCGCT CAATTACTCA AGCAGTAGAT
CCTGCAGCGA AATTACAGTT AATACTCCAA AGTCTCTAA
 
Protein sequence
MNNAINSPVI VALDNMTKDA SLALADQLDP ALCRLKVGKE LYTRYGPEIV KALHQRQFEV 
FLDLKFHDIP NTTAQAVLAA AELGIWMVNV HASAGYDAMS LAKQRLLDND FDTLLIAVTV
LTSMDNEALI QTGITDGLEA QVSRLAQLTK QACLDGVVCS AQEAKALKAL CGQDFKLITP
GIRLLDDNAD DQKRICTPKQ ALLDGSDYLV IGRSITQAVD PAAKLQLILQ SL