Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1670 |
Symbol | |
ID | 4034569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2056590 |
End bp | 2057288 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637974135 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_580931 |
Protein GI | 93006494 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0087165 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.167028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAACG CAATTAATTC TCCTGTCATC GTTGCATTAG ATAATATGAC AAAGGATGCC TCTCTTGCAT TAGCTGACCA ATTAGATCCG GCATTATGCC GATTGAAAGT AGGTAAAGAG CTGTATACCC GCTATGGCCC TGAGATAGTC AAAGCACTGC ATCAGCGCCA ATTTGAGGTT TTTTTAGACC TTAAATTTCA CGATATCCCC AATACCACTG CACAAGCAGT ATTGGCTGCC GCTGAGCTTG GTATATGGAT GGTCAACGTC CATGCAAGTG CCGGTTACGA TGCGATGTCA TTGGCAAAAC AGCGCTTGCT AGATAATGAT TTTGACACGC TATTGATAGC AGTGACTGTC TTAACATCTA TGGACAATGA AGCACTCATA CAAACGGGCA TCACCGACGG CTTAGAGGCA CAAGTGAGCC GCTTAGCACA ATTAACCAAG CAAGCATGTC TTGATGGTGT AGTATGCTCA GCACAAGAAG CAAAGGCATT AAAGGCATTA TGTGGTCAGG ACTTTAAACT GATTACGCCT GGTATCCGTC TGCTAGATGA TAATGCTGAT GATCAAAAGC GTATTTGTAC GCCAAAACAG GCATTACTTG ATGGCTCTGA TTATTTGGTG ATAGGGCGCT CAATTACTCA AGCAGTAGAT CCTGCAGCGA AATTACAGTT AATACTCCAA AGTCTCTAA
|
Protein sequence | MNNAINSPVI VALDNMTKDA SLALADQLDP ALCRLKVGKE LYTRYGPEIV KALHQRQFEV FLDLKFHDIP NTTAQAVLAA AELGIWMVNV HASAGYDAMS LAKQRLLDND FDTLLIAVTV LTSMDNEALI QTGITDGLEA QVSRLAQLTK QACLDGVVCS AQEAKALKAL CGQDFKLITP GIRLLDDNAD DQKRICTPKQ ALLDGSDYLV IGRSITQAVD PAAKLQLILQ SL
|
| |