| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1600 |
|---|
| Symbol | |
|---|
| ID | 4035958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 1960788 |
|---|
| End bp | 1961687 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637974063 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_580861 |
|---|
| Protein GI | 93006424 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4120] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.852679 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTAA TTGCTTTTTT TGGTGCACTT GAAAGTGGTC TGATTTATGG CCTAGTGGCG
CTTGGCGTCC TTATTTCATT TCGTACCCTC GACTTCCCTG ATTTGACCGC TGACGGCAGT
TTTCCATTAG GTGGTGCGGT CGCTGGCATC TCTATCATCG CTGGTGTCAA TCCATGGCTT
GCCTGCGCCT TTGGTATGCT AGCCGGCTCA ATTGCTGGTA TCGTCACTGC TTGGTTGCAC
GTTAAGCTTG GCATACTACA GCTCCTTGCC AGTATCTTGG TGATGGTTGC GCTCTATTCT
ATCAACCTAC GTATTATGGG TGCGCCAAAC TTGCCGCTAT TGGGTGAAAC GACTGTCTTT
AGTACCTTAG TCAATGATGG CAATGGCTAT TGGATGCGCT GTCTGATCAT TGGTATTGTC
GTACTACTGG CCATGTTATT TTTAAATTGG TTTTATAGTA CTGAAACAGG TTTATCTATG
CGAGCAACCG GCTCAAACCT ACGTATGGCG CAAGCACAAG GTATCAATAC CTCATGGATG
ACCATCATCG GTATGGCCAT TTCTAACGGT TTGATTGCTC TAGCAGGTGC ACTGTTTGTA
CAGACACAAG GTGGCGCAGA TATCTCAATT GGTATCGGTA CTATCGTTAT TGGTTTGGCA
GCGGTCATCA TCGGTGAGAC GATTATTCCC GCTAAACGCA TTTGGCTGAT TACATTTGCG
GTGGTCGTCG GTGCGGTGTT ATACAAGCTG TTTATTCAAG TGGCACTATC GAGCGATACG
CTACGTAGTA TCGGCTTTGG TCCGCAAGAT TTGAACTTGA TTACTGCCCT ACTCGTGGTA
TTGGCATTGG TATTGCCGAA AGCTAAAAAT AAATTCTTAA GTCGTAAAGT TCGGGCTTAA
|
|---|
| Protein sequence | MSLIAFFGAL ESGLIYGLVA LGVLISFRTL DFPDLTADGS FPLGGAVAGI SIIAGVNPWL
ACAFGMLAGS IAGIVTAWLH VKLGILQLLA SILVMVALYS INLRIMGAPN LPLLGETTVF
STLVNDGNGY WMRCLIIGIV VLLAMLFLNW FYSTETGLSM RATGSNLRMA QAQGINTSWM
TIIGMAISNG LIALAGALFV QTQGGADISI GIGTIVIGLA AVIIGETIIP AKRIWLITFA
VVVGAVLYKL FIQVALSSDT LRSIGFGPQD LNLITALLVV LALVLPKAKN KFLSRKVRA
|
|---|
| |