| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1593 |
|---|
| Symbol | |
|---|
| ID | 4035356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1951561 |
|---|
| End bp | 1952190 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637974056 |
|---|
| Product | 3-oxoacid CoA-transferase, subunit B |
|---|
| Protein accession | YP_580854 |
|---|
| Protein GI | 93006417 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATGGA CAAGAGAGCA GATGGCACAG CGTGCCGCAC AAGAGTTACA AGACGGTTAT
TATGTTAACT TAGGCATCGG TCTACCGACA CTCGTTGCAA ACTATATCCC TAAAGACGTC
GATGTCTGGC TACAGTCAGA AAACGGCTTA TTAGGTATTG GCGAGTTTCC TACTGCAGAA
AACGTCGATG CAGATTTGAT TAATGCAGGT AAACAAACGG TCACTGCCGA ATCAGGTGCG
AGTTATTTTA GTAGTTCAGA GTCGTTTGCG ATGATTCGTG GCGGTCATGT TAACCTTGCA
ATATTGGGCG CGATGGAAGT CTCAGAGCAG GGCGATTTGG CAAACTGGAT GATTCCCAAA
AAAATGGTTA AAGGCATGGG CGGCGCGATG GATTTGGTCG CAGGCGTACA GCGTGTGATT
GTGCTCATGG AGCAAGTTAA TAAACACGGC GAGCCAAAAA TCCTTGCCAA TTGCGAATTA
CCACTGACAG GGAAAGGCGT TGTTGATCGT ATTATCACAG AGCTTGCGGT ACTTGATGTG
ACTGATAATG GTCTAAAACT GGTTGAGTTA GCAGATGGTG TTAGCTTCGA TGAGCTACAA
GAAAAAACAC CAGTGAGCAT TGCTCAATAG
|
|---|
| Protein sequence | MAWTREQMAQ RAAQELQDGY YVNLGIGLPT LVANYIPKDV DVWLQSENGL LGIGEFPTAE
NVDADLINAG KQTVTAESGA SYFSSSESFA MIRGGHVNLA ILGAMEVSEQ GDLANWMIPK
KMVKGMGGAM DLVAGVQRVI VLMEQVNKHG EPKILANCEL PLTGKGVVDR IITELAVLDV
TDNGLKLVEL ADGVSFDELQ EKTPVSIAQ
|
|---|
| |