| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1557 |
|---|
| Symbol | |
|---|
| ID | 4034409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 1910649 |
|---|
| End bp | 1911845 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637974020 |
|---|
| Product | aromatic amino acid aminotransferase |
|---|
| Protein accession | YP_580818 |
|---|
| Protein GI | 93006381 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00015304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAC GTATCGATTA CTATGCCGGC GACCCAATCT TAGGATTGAT GGACAAATTT
GCAGCCGATA ACAACCCAGA TAAAGTCAAT TTGGGTGTCG GTGTCTATTA TGACGAAGAT
GGCAAAATGC CAGTACTTGA GTGTGTAAAA ACAGCTGAAC AACGTATTGC AGACCCAATC
TCTCCTCGCC CGTATTTACC AATGGCAGGT TTACCAGGAC ATCGCAAAGG CTGTCAAGAA
TTGCTGTTTG GTAAAGACGC TCAGATTTTA CAAGATGGCT TAGTGGCTAC TATCGCGACC
ATCGGTGGCT CTGGTGCACT AAAAGTCGGC GCAGAATTCA TCCACGAATG GTTCCCGCAG
TCTAAGTGTT ACGTGAGCGA CCCTACATGG GGCAATCACA TTGCTATTTT TGAAGGGTCT
GACGTCGAAG TCGGTAAATA CCCGTACTAC GATACTGCTA CTGGTGGCAT CAAATTTGAT
GAGATGATCG CGTTTTTTGA GACATTGAAT AAAGATGATG TTCTGCTGCT TCATCCTTGT
TGTCATAACC CAACGGGCGT TGATTTGACT CGTGAGCAAT GGGATCAAGT CCTAAACGTC
ATTCAAGCGC GCGAGCTGAT TCCGTTTATG GACATCGCTT ATCAAGGCTT TGGCGAAGAT
ATGGACAGCG ATGCTTACGC CATTCGTAAA GCCGTCGATA TGGGTCTGCC ATTGTTTGTG
AGTAACTCAT TCTCTAAAAA CTTATCGCTA TATGGCGAGC GTGTCGGTGG TCTATCAGTT
GTTTGCCCAA CGGTAGATGA AACTGATCGC GTCTTTGGTC AGCTGAACTC TACGGTACGT
CGTATCTACT CAAGCCCGCC ATCACATGGT GGTCGTGTGG TTGATATCGT TATGAACGAC
GAAGCCTTGC ATGAGCAATG GGTTGGCGAA GTATATGCGA TGCGTGACCG TATCAAATCT
ATGCGTACCA AACTCAAATC AGTATTAGAA GAAAAAATCC CAGGTCGTAG CTTTGATTAC
TTGACCGCCC AGAACGGTAT GTTTAGCTTT ACAGGTCTGA CGCCTGAACA AGTTGCACAA
CTACAAAGCA AGTATGGTAT CTATATGGTA TCGAACTCAC GTATGTGTGT TGCCGGCTTA
AACAGTACCA ATATCGACTA TGTTGCCAAT GCGATGGTTG ACGTTTTAAA AGATTAA
|
|---|
| Protein sequence | MFERIDYYAG DPILGLMDKF AADNNPDKVN LGVGVYYDED GKMPVLECVK TAEQRIADPI
SPRPYLPMAG LPGHRKGCQE LLFGKDAQIL QDGLVATIAT IGGSGALKVG AEFIHEWFPQ
SKCYVSDPTW GNHIAIFEGS DVEVGKYPYY DTATGGIKFD EMIAFFETLN KDDVLLLHPC
CHNPTGVDLT REQWDQVLNV IQARELIPFM DIAYQGFGED MDSDAYAIRK AVDMGLPLFV
SNSFSKNLSL YGERVGGLSV VCPTVDETDR VFGQLNSTVR RIYSSPPSHG GRVVDIVMND
EALHEQWVGE VYAMRDRIKS MRTKLKSVLE EKIPGRSFDY LTAQNGMFSF TGLTPEQVAQ
LQSKYGIYMV SNSRMCVAGL NSTNIDYVAN AMVDVLKD
|
|---|
| |