| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1531 |
|---|
| Symbol | |
|---|
| ID | 4034636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1881648 |
|---|
| End bp | 1882331 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637973995 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_580794 |
|---|
| Protein GI | 93006357 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.357864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGTC AGCATCAATT CAAGGTACGA GAAGAGAATA TCTTAGCAAT GGCAGAGCAA
TTGCTACTTG AGTCAGGCGA TGGCGACATC ACTTTAGACA GCTTGGCAGA CCAGCTTGAT
TTGGCTAAAG GCACATTGTA TAAGCATTTC TCTAGTAAAG ATGAGCTCTA TCTGCGTATT
ATCATTCGTT ATGAAGAGCA GCTGTTTGAG ATTAATCGTA TTGACGATTG CCCATCAGCA
GGCGTCGCTC GTATGATTTT CCAGCAATTA TTTAATCCAC AAAAAGCCAT GCTACTCAAT
CAAATCGAAG AGCGTTTGGC GGCATCAGTG ACGGGTCTTA ATCGCTTATT TGGTGAGCTG
TATGATATTC GCCGTCAGCG CATGAAGCGC TTGATTGATA TTATCAGTGC TTATCTGAAG
GATGAGCACA GTAGCTTAAG CACGCGTGAT TACCTATCAT CTATCTGGGC GATGGGTCAG
GGCGGTGCAG GGCTGTTGAA CTCAAGTTTT TATCAGCGTT ATTTGGGACG CCGCGATACT
CTGCGTTATG CCTTTGTCCA ACAAATGCTA GAGCTGCCAA GCCATTACCC GGCGGCTGAG
GATGAAGTGA TGGATGAGGA TATGCAGGAA TTGGTCGAAC AGATTGATAC TGAGTCAGAA
GAGCATCGCA ATACCAATTA TTAG
|
|---|
| Protein sequence | MSRQHQFKVR EENILAMAEQ LLLESGDGDI TLDSLADQLD LAKGTLYKHF SSKDELYLRI
IIRYEEQLFE INRIDDCPSA GVARMIFQQL FNPQKAMLLN QIEERLAASV TGLNRLFGEL
YDIRRQRMKR LIDIISAYLK DEHSSLSTRD YLSSIWAMGQ GGAGLLNSSF YQRYLGRRDT
LRYAFVQQML ELPSHYPAAE DEVMDEDMQE LVEQIDTESE EHRNTNY
|
|---|
| |