Gene Pcryo_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1516 
Symbol 
ID4034275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1863130 
End bp1864290 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content47% 
IMG OID637973980 
Productbutyryl-CoA dehydrogenase 
Protein accessionYP_580779 
Protein GI93006342 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT CATTAACCGA TGACCAAATT GCCTTTCGCC AAACTGCTAG ACAGTTTGCC 
CAAAAAGAGC TTAAGCCCAA CGCTGCTGAA TGGGATCGCA CTTCGCACTT CCCAATTGAT
GTGATTAAAA AATCAGGCGA GCTTGGCTTT TTAGGGTTAT ATACCAACCC TGAGTATGAT
GGCTTGGGCT TGCCGCGTTT AGATTCTGCC ATGGTTTTTG AAGAGCTAGC ATGGGGTGAT
ACCGCGGTGG CTGCTTATAT GAGTATTCAT AATATGGCAG GCTGGATGAT TGGTGAGTTT
GGCAGTGATA CATTGTGCAA AAAATATTTG CCAAATATGG TCAGTGGTGA ATGGCTTGGC
AGCTACTGCT TAACAGAACC TAATGCCGGT TCTGATGCCG CATCATTACG TACCAAAGCC
GATAAGCAAG GCGAGTATTA TGTGCTGAAC GGTGAAAAAA CCTTTATTTC AGGGGCCGGC
TCAACCGATG TGTTGGTCGT TATGGCGCGT ACGGGCGCTG CAGGACCAAA GGGGATTTCA
GCATTCGTGG TTGATGCCGA TAGTGCTGGT ATTGAATACG GCAAAAACGA GCATAAAATG
GGCTGGAAAG CACAGCCAAC ACGGACGATA AGCTTTAAAG ATGTCAAAGT GCCAGTAGAG
AACCTCATCG GCGAAGAAGG TCAAGGCTTT CGTATCGCTA TGAAAGGGTT AGATGGCGGT
CGAATTAATA TTGGTATCTG TGCAGTAGGA ACAGCGCAAG CAGCGCTTGA GACAGCGACC
AATTACGTGC AAGAGCGCAG TCAGTTTGGC AGCCCGATTG CCAGCTTACA GTCGGTACAG
TTTAAGCTTG CTGATATGTT GACTCAAACC ATCACGGCAC GGCAAATGCT GTATTTAGCG
GCGAGCAAAG TCGACAATAA CGATGCGCAA GCCTCTACTT ATTGTGCGAT GGCAAAGCGT
TTATCGACCG ATCTTTGTTT TGATGTCGCT AACGAAGCTC TGCAACTACA CGGTGGTTAC
GGCTATCTCA ATGAGTATCC GCTTGAGCGT CATGTGCGAG ATTTGCGTGT GCATCAGATT
TTGGAAGGCA CCAATGAGAT TATGCGCGTG ATTGTCTCGC GTCAGCTATT ACAAGACGAT
GCATTGAGCC AACTGCGCTA A
 
Protein sequence
MDFSLTDDQI AFRQTARQFA QKELKPNAAE WDRTSHFPID VIKKSGELGF LGLYTNPEYD 
GLGLPRLDSA MVFEELAWGD TAVAAYMSIH NMAGWMIGEF GSDTLCKKYL PNMVSGEWLG
SYCLTEPNAG SDAASLRTKA DKQGEYYVLN GEKTFISGAG STDVLVVMAR TGAAGPKGIS
AFVVDADSAG IEYGKNEHKM GWKAQPTRTI SFKDVKVPVE NLIGEEGQGF RIAMKGLDGG
RINIGICAVG TAQAALETAT NYVQERSQFG SPIASLQSVQ FKLADMLTQT ITARQMLYLA
ASKVDNNDAQ ASTYCAMAKR LSTDLCFDVA NEALQLHGGY GYLNEYPLER HVRDLRVHQI
LEGTNEIMRV IVSRQLLQDD ALSQLR