| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1508 |
|---|
| Symbol | pepN |
|---|
| ID | 4034267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1853119 |
|---|
| End bp | 1855761 |
|---|
| Gene Length | 2643 bp |
|---|
| Protein Length | 880 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637973972 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_580771 |
|---|
| Protein GI | 93006334 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.112565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACCG CTGAAAACGA TGCACAAATC ATCAATGCTG AAATGCCTGA TGTACCTCTC
CATGCGCCCA GTAAAATCAA TTTAAAAGAC TATCAAAAGC CAAGCTTCGA TGTTGAAACT
GTCAGCTTAG ATATCAAGTT ATTTGAAGAC CATGCACAGG TAGATAGTAC TCTAAAGATG
GTACGTCAAA GCGCAGGCGA TATCGTTTTA TTTGGTGAAG ATTTAGAGCT GTTGGCTTTG
TCTATGAATG GTGAGGCATT GAGTGCTGAG CGTTATGAGC TGTCAGCAGG TAAGCTTACG
ATTAGTGATG CTCCTGATGA GGTGACATTG GCGCTACAAG TGCGTATCTG TCCACAGACC
AATACTGCCC TTGAGGGGTT TTATATGGCG GGCAGTGGTG ATGAGACGAT GTTTGTCACC
CAGTGCGAGC CGGAAGGTTT CCGTAAAATT ACCTTTTATC CAGACCGCCC TGACGTACTC
GCGATATTTA CCACTCGCCT TGAAGCAGAC AAGCGCTATC CAACACTATT AGCCAATGGT
AATTTGGTTG AAGCGGGGGA GATGATCGAT GCGCCAAACC GCCATTATGC TATTTGGCAT
GATCCGACCA ATAAGCCAAG CTATCTATTT GCTTGTGTGG TCGCTGACTT AGATGTATTA
GCGGATAGCT ATACGACCAG TGAAGGTCGA GAAGTCTTGC TGGAAGTCTA TGCAAAGTCT
GCTGACATCG ATAAATGTAC TGTCGGTATG CAGGCGCTCA AAGATTCGAT GCAATGGGAT
GAAGTTAATT ACGGTCGTGC TTATGACTTA GATCGTTATA TGATCGTTGC AGTCAGTCAA
TTTAATATGG GTGCGATGGA AAATAAAGGG CTAAATATCT TTAATACTGC CTGTGTATTA
TCAAGCCCTG AAACCACGAC TGATACTCGT AGCTTTAGCG TAAAAGCTAT TATCGCCCAT
GAGTATTTCC ATAATTGGAC GGGCAATCGG ATTACTTGTC GTGATTGGTT TCAGTTATGT
TTAAAAGAAG GCTTTACCGT TTACCGCGAT CAATCGTTTT CAGCGGATCA GCAATCAAGC
GCGGTACAAC GTATCGATGA CGTCGCGACT TTGCGTGCCC ATCAGTTTGC AGAGGATGCA
GGACCACTTG CCCATCCTGT ACGTCCTGAG AGTTTTGTTG AGATTAATAA CTTTTATACC
ACCACCGTCT ATGAAAAAGG CGCTGAAATT GTCCGTATGA TAGCCAATAC CTTGGGCGCT
GATGATTTCC GAAAAGGGAC GGACGAGTAT TTCCGTCGTT ATGATGGTCA AGCGGTCACG
GTTGAAGACT TTTTATCTGC GCTTAGTATT ACTAACGGTA AAGTAGAAGA CTTTATCGAT
TGGTATCGCC AGCCAGGTAC GCCAGTGGTG TCCGGTCATC AAGACTATGA TAGCGCCACG
CAAACATTGA CCATTACGTT GAGTCAGCAA ACCCGCCATG TGAGCGGCTT TGATGCGCCA
AAACCCTTGC CTATTCCAGT TGCAACGGCA TTATTTGATA AAGAAAGCGG CAAAATTATT
GCTGAGAGTA TGTTGCTATT AGACCAAGCT ACACAAACCT TTACTTTTGA AGGCGTAAGT
GCTGAGCCTG TGGTGTCTTT GCTACGTGAT TTTAGTGCGC CTGTACAGCT GAATTATGAT
TATCAAGATG AAGATTTGGC ATTTTTACTC AAACATGAAA CCAATGGCTT CAATCGTTGG
CAAGTGACGC AGATGCTGGT CAACCGTATT TTGTTGCCCA CCCAAGGCAC AAAGAGCAAT
CCTGATGTTT ATCTAGCGGC ATTGGCGCAG ACATTGCCAG TGCTCGCAGG TGAAGATGCA
ATGCTAGCAG CGCGTTTACT TGATATTCCA TCAGCTCAAG AGTTGGCGGC TGCTATTCCT
GAAGATTATG ATCCAGAAGT GGTCAAAGCG CAGCGTGAAG GTTTGTATCA GCAGCTAGCA
GAGGCGTTAA AAGATCAATG GGAAATGCTT TACAAGCAAC TGCCATTGCA CTCCTATGAA
GACAGTGCAG AAGCTCGTGG TGAACGGGCA CTACGTAATG TGGTGCTAGA TATGGCATTG
AGCGCGAACG TGGAAGGCGC TGTAGAGTGG GCACAGCAGC AGTATGATAA TGCCAGCTGT
ATGACGGAAC GTTTTGGCGC ACTAAAGGCC ATGGTCAATC ATCAAGTGGC AAATGCTGAT
GCGTATTTAG CAGATTTTTA TCAGCGTTTT CAAGCCGATG ATTTGGTGAT TGATTTGTGG
TTTAGTGTCC AAGCATCTGC TGACAACGTC AATGCTGATG TTATTAAATC ACTATTAGCA
CATGAAGATT TCGATTGGAA TACGCCCAAT CGCGTACGTT CAGTCATCAG CGCTTTTACC
TCGCAGCCAA CTGCATTATG GACGCAACAA GGTTTGGATA TCTATACAGA CGTGATTAAG
AAGCTAGATG ATTCTAACCC GATGATAGCC TCGCGCCTAC TACAAGTATT GGCACGTTGG
AATACGTTAG CTGAGCCACG CCGTCAAATG GCTCATTCGC AGCTGCTCGA TGTGCAGCAG
CAAGTATCCT CTAAGCATGT GCATGAGAGT CTAAGCAGTG TGCTGGGTGC AGTGACTGCA
TAG
|
|---|
| Protein sequence | MSTAENDAQI INAEMPDVPL HAPSKINLKD YQKPSFDVET VSLDIKLFED HAQVDSTLKM
VRQSAGDIVL FGEDLELLAL SMNGEALSAE RYELSAGKLT ISDAPDEVTL ALQVRICPQT
NTALEGFYMA GSGDETMFVT QCEPEGFRKI TFYPDRPDVL AIFTTRLEAD KRYPTLLANG
NLVEAGEMID APNRHYAIWH DPTNKPSYLF ACVVADLDVL ADSYTTSEGR EVLLEVYAKS
ADIDKCTVGM QALKDSMQWD EVNYGRAYDL DRYMIVAVSQ FNMGAMENKG LNIFNTACVL
SSPETTTDTR SFSVKAIIAH EYFHNWTGNR ITCRDWFQLC LKEGFTVYRD QSFSADQQSS
AVQRIDDVAT LRAHQFAEDA GPLAHPVRPE SFVEINNFYT TTVYEKGAEI VRMIANTLGA
DDFRKGTDEY FRRYDGQAVT VEDFLSALSI TNGKVEDFID WYRQPGTPVV SGHQDYDSAT
QTLTITLSQQ TRHVSGFDAP KPLPIPVATA LFDKESGKII AESMLLLDQA TQTFTFEGVS
AEPVVSLLRD FSAPVQLNYD YQDEDLAFLL KHETNGFNRW QVTQMLVNRI LLPTQGTKSN
PDVYLAALAQ TLPVLAGEDA MLAARLLDIP SAQELAAAIP EDYDPEVVKA QREGLYQQLA
EALKDQWEML YKQLPLHSYE DSAEARGERA LRNVVLDMAL SANVEGAVEW AQQQYDNASC
MTERFGALKA MVNHQVANAD AYLADFYQRF QADDLVIDLW FSVQASADNV NADVIKSLLA
HEDFDWNTPN RVRSVISAFT SQPTALWTQQ GLDIYTDVIK KLDDSNPMIA SRLLQVLARW
NTLAEPRRQM AHSQLLDVQQ QVSSKHVHES LSSVLGAVTA
|
|---|
| |