Gene Pcryo_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1489 
Symbol 
ID4034457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1832965 
End bp1833534 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content45% 
IMG OID637973953 
ProductOstA-like protein 
Protein accessionYP_580752 
Protein GI93006315 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0428752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTA ATTCTTTGCC TACTTTACGC TTGCTATCGA CACGCTCTAT TCAAGTGTCG 
CATAGATTGC GTGCACTGCC AGTAGTTATG CTGTTGGCGC TCCCACTATA CAGCCATGCT
CTGCCGTCAG ATGCCAATCA GCCTATTAAA TTATTGGCAG ACAAAGCCAC TTATAGTGAG
CGTAGTGGTA TTACAAGTTA TTCTGGTACA GTAGTTATTA CTCAAGGTAC GTTTAAGATG
ACCGCTGATA ATATTACGGT CAATTTATCA CAAGGTCGAA GTATCAATTC TGCAGTAGCA
ACAGGGCGTC CAGCGACGAT GCAGCAAGTT GTGACGCAAG AAAAAGGTCT GGCAAAAGGT
CAGGCAAATA AGATTGACTA TAACGCTGTG ACGGGTATCG TGACACTAAC GGGCAATGCA
AAATTGGTAC AAAATGGTGC AAGCTTCGCA GGTAATGTCA TTCGTTATAG CCTCAAAGCT
GGTGATGTGG AAGCGACTGC TGGCGGCAAT CAGCGCGTCG AATTGGTATT CCCGCCTAAC
AATAGTACCA GTCAGAGCGG TATACGTTAG
 
Protein sequence
MKSNSLPTLR LLSTRSIQVS HRLRALPVVM LLALPLYSHA LPSDANQPIK LLADKATYSE 
RSGITSYSGT VVITQGTFKM TADNITVNLS QGRSINSAVA TGRPATMQQV VTQEKGLAKG
QANKIDYNAV TGIVTLTGNA KLVQNGASFA GNVIRYSLKA GDVEATAGGN QRVELVFPPN
NSTSQSGIR