Gene Pcryo_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1488 
Symbol 
ID4034456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1832062 
End bp1832859 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content43% 
IMG OID637973952 
ProductABC transporter related 
Protein accessionYP_580751 
Protein GI93006314 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.123846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATA ATAAAAATAA TGCCATTTTA GTAGAGAATC AAACCATAAC AGCGAATGAT 
GCTGTTGAGC CGGTCGCTCG TTTGTCGATG CAAAACTTGG GTAAGCGCTA TGGTAAGCGC
TGGGTCGTCA AAGATGTCTC ATTCTCTGTT GAGCAAGGGC AAGTCGTTGG ATTGCTAGGT
CCAAATGGAG CCGGTAAAAC GACCAGTTTT TATATGGTAG TCGGACTGGT CAATATGGAT
AAAGGCCGTG TCACCTTGGG GAATATGGAC TTATCTAAAT ATGCTATGCA TGAGCGTGCG
CGTGCCGGTA TTGGTTATTT ACCGCAAGAA GCCTCTATTT TTCGTAAGCT ATCCATTGAA
GACAATATTT TAGCCATTTT ACAAACTCGT AAAGATTTGA ATGGTAACCA GCAGCGTCAA
GAGCTTGAAA AGCTCATTGG TGATTTTCAC TTAGAACATG TACGAAAATC TCTAGGTATG
AGCGTATCAG GCGGTGAGCG TCGTCGTTGT GAGATTGCTC GCGCTCTAGC AGCTGACCCC
AAGTTTATCT TATTAGATGA GCCTTTTGCC GGTGTAGATC CTATCTCTGT CGGTGATATC
AAAGATGTCA TTTTAGCGCT CAAACGACGT GGTATCGGTG TGTTAATCAC TGATCACAAT
GTTCGTGAGA CTTTAGCGAT TTGTGAAAAA GCCTATATCG TATCAGAAGG CGCTATCATT
GCTGAGGGTA CCTCAGAAGA AGTTCTGGAA AATGAGCTGG TGAAATCTGT GTATCTTGGT
AAAGATTTTC AGGTATAG
 
Protein sequence
MNDNKNNAIL VENQTITAND AVEPVARLSM QNLGKRYGKR WVVKDVSFSV EQGQVVGLLG 
PNGAGKTTSF YMVVGLVNMD KGRVTLGNMD LSKYAMHERA RAGIGYLPQE ASIFRKLSIE
DNILAILQTR KDLNGNQQRQ ELEKLIGDFH LEHVRKSLGM SVSGGERRRC EIARALAADP
KFILLDEPFA GVDPISVGDI KDVILALKRR GIGVLITDHN VRETLAICEK AYIVSEGAII
AEGTSEEVLE NELVKSVYLG KDFQV