Gene Pcryo_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1450 
Symbol 
ID4033898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1785018 
End bp1785917 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content47% 
IMG OID637973914 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_580713 
Protein GI93006276 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGACGTT TCTTTTATGC CACTAATAGC AACATTAGTA ATGACGTTAC CAATGAAAAG 
GCTGCGACCT ACCCTCAGCT TAGCACCTTG CCTATCGGTG CCAGCGTCGA ATTAACCGAA
AGTATCATCC ATCATTGGTG CCGTGTATTA CGCGCTAATA TTGGCGATAA AGGTATCTTA
TTTGACGGTT TTGGCGGTGA ATATCAGGTA CAGATACTGA CCATCAGTAA AAAAAACGCG
ACTGTGACCC TGCTTTCTCA CACAAATAAT GATAATAGTG CACCAATATT TACCAAAATC
GGGCTGGTAA TGAGTCGTGG CGAACGGATG GATTACGCCA TTCAAAAATC TACCGAGCTT
GGCGTCACTG CCATCCAATT GCTAAGCAGT CATCATGGCG AGGTCAACCT GAAGCCTGCC
CAAGTCGAAA AAAAGCTTGC TCATTGGCAG CAGGTTGCGA TTGCTGCCTG TGAGCAATGC
GGTCTTAACC GTCCACCGCT TATTATTGCG CCTATTCCCA TTAACGATTG GCTTAAGCCT
ATCACAACGA CCACGCCTGT GAAGATAGAA GCGACTATCA GCTCTATGGT TACCACCCTT
AGTCAGGATG CTTATTATCA AGTATTACAA CAACCCGCTG ATTTGCGTCT ACAGCTTAGT
GTACCAGCGG CAGGACAACC TGCTATGCCT GATTCGCTAC TATCGGTATT ACAGCAACCA
GTGCCTTATA TTGAATTGTT GATTGGTCCT GAAGGTGGCC TAAGTGCTAA CGAATGCGCT
CAAGCAGCAG ACGTTGGTTT TGAGCCTTGG CAAATTGGCA CAAGGGTATT ACGAACAGAA
ACTGCGCCAG TAGTCGCCTT GGCAACATTG CAAGCGCTGT TGCCACGTGT CAATCCTTAG
 
Protein sequence
MRRFFYATNS NISNDVTNEK AATYPQLSTL PIGASVELTE SIIHHWCRVL RANIGDKGIL 
FDGFGGEYQV QILTISKKNA TVTLLSHTNN DNSAPIFTKI GLVMSRGERM DYAIQKSTEL
GVTAIQLLSS HHGEVNLKPA QVEKKLAHWQ QVAIAACEQC GLNRPPLIIA PIPINDWLKP
ITTTTPVKIE ATISSMVTTL SQDAYYQVLQ QPADLRLQLS VPAAGQPAMP DSLLSVLQQP
VPYIELLIGP EGGLSANECA QAADVGFEPW QIGTRVLRTE TAPVVALATL QALLPRVNP