Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1443 |
Symbol | trpC |
ID | 4033891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 1775537 |
End bp | 1776424 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637973907 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_580706 |
Protein GI | 93006269 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.810635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACTA ACAAAACAGT TGGCTCACAT ATTCCTTCAG TATTACAACG TATCGTTGCT ACCAAACATG AAGAGGTTGC TGCTGCTCGT AATCTGTTAT CACTTGAGGA CTTACAAGCG AAAGTCGCGG CAGATAAACA ACCTCGTCGC GGTTTTGCCA GTGCCTTGCG CGCCGCTAAT ATCGGTATTA TTGCTGAGAT AAAAAAAGCC TCGCCTTCTA AAGGTATTAT CAATCACAAC TTTGCGCCGG CTTTATTTGC TAAGCAGTAT GAGCAATCAG GCGCAAGCTG TCTGTCTGTA TTGACAGATC GCGATTACTT CCAAGGTGAT GATAGCTACT TGGTCCAAGC ACGTGAAGCT TGTAATCTGC CGATATTACG TAAAGATTTT ATGATTGATC TCTATCAGAT TTATCAGTCA TATCTACTTG GCGCAGATTG TATATTACTG ATTATGGCTT GCCTTGATGA TGCACAGGTG CAAGAGCTAC ATGCGCTTAG CATCGAGCTT GGTATGGATG TGTTGATAGA AGTGCATACG GCAGAAGAGC TTGAACGTGC CCTACAACTG CCACATTCAG AGCACAATAT CTACGGTATC AATAACCGTG ACTTAAATAC CTTTGATGTG GATTTGCAGA CGACACTTGA TTTAAAGAAC GCCCTATTAC GCGAGCTTGC CATTGATGAT GCATTTTCTG CTAACTCTAA TGATAGCTTG CTACGACCGC TTATCGTGAC CGAAAGTGGC ATTCACAGCA GTAACGATAT CCGCATGATG CTAAGCCATA ATATTCAGCA CTTTTTAATC GGGGAGCAAT TTATGAAAAC CGATCATCCT GGACAAGCAT TACAATCCTT ACTTGCGAGC GTCGCAGCAC AGGCGTAA
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Protein sequence | MTTNKTVGSH IPSVLQRIVA TKHEEVAAAR NLLSLEDLQA KVAADKQPRR GFASALRAAN IGIIAEIKKA SPSKGIINHN FAPALFAKQY EQSGASCLSV LTDRDYFQGD DSYLVQAREA CNLPILRKDF MIDLYQIYQS YLLGADCILL IMACLDDAQV QELHALSIEL GMDVLIEVHT AEELERALQL PHSEHNIYGI NNRDLNTFDV DLQTTLDLKN ALLRELAIDD AFSANSNDSL LRPLIVTESG IHSSNDIRMM LSHNIQHFLI GEQFMKTDHP GQALQSLLAS VAAQA
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