| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1400 |
|---|
| Symbol | |
|---|
| ID | 4033710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1715197 |
|---|
| End bp | 1720056 |
|---|
| Gene Length | 4860 bp |
|---|
| Protein Length | 1619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637973864 |
|---|
| Product | NAD-glutamate dehydrogenase |
|---|
| Protein accession | YP_580663 |
|---|
| Protein GI | 93006226 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAACT CTCTAAATAT CGCAAAAGAG CGGATCAGCC AGATAAGCGA TATTGCCACC
AGTTATGTAC AAGCGGACAA ATCATTATTT GACCACTTTA TTCATAGCTA CTATCAGCCA
TTACATCAAG AGACTGCAAA GGACATCAGT AATGCTGATT TGGCTGGGAT GGCGCTGCAT
CATTTTACGC TATTAAAAGC CTATGATCGT AGCCATCCGC AGCTTGCCAT ATTAAACCCC
ATTGCAGAAG AGCAGCATTT TCACAGCTCA CATACCGTTA TCCAAATCGT TGCCTATGAT
CGACCATTTT TGGTCGACAC GCTATTGATG AGTCTTGAAG AGCAAGGCAT CGATGTGCAT
CGTACTTATC ATATCATTGT CAATGTCGAA CGCGATGAAA ATGGCGCGAT CACTAAAGTT
GAAAGCGCTC AAGAAAGTGG CACCTCACAC ATGTCTTTGA TTCATTGTGA AATCTCTTAT
CAAGACAATG ATGAATTGGC GGCATTAAAA CAGATGCTGC TGGCAAAAGT AGACACCCTT
GATGTCGTCG TTGATGACTG GCAGCAGATA CGTGCCAAGC TAACCGATAT AAAAGCGGAA
CTTGCTACAA AAACACTGCC GGAAGTATTT TACTCTCAAC AAGAGATTCA AGCATTTTTA
GATTGGGTCT TGGACGATCA CTTTATCTTT TTGGGATATC GAGAGTACCG CTTGGAAGAC
GGGCACAGAA TCGAGGTTAA TAGTGTTGGC AATACAGCCA ACCAAGACGA CCGTAGTGAT
TTGGATTTAT TTTCTATTGG TAATAGTGGG CTTGGGCTAT TACGTGGCGG TAGTGAAGAT
CAGCTTTCAA AAAGCTTTGA CGAGCTGCCA AGCAATCTAA AAAGACTGCT AACAGCGCCG
CAAGTATTGG TATTGTCAAA ATCAAGCCGA GTATCGCCAG TACATCGCCC AGTTTATATG
GATTTTTTGG GCATTCATAA GTTTGATGAT AATGGAAAAC TCATCGGTGA GCATCGTTTT
ATTGGTCTTT TTACAGCGCA AGCTTATCAA CTAAGCGTGC AACAAATTCC ATTATTACGC
GAAAAATCCA ATAAAATCAT GGCGATGGCA AAACTACCAC GTGATGGTCA TGCGTATCAT
AAAATGATGC ATATCATTAA CACCTTGCCG CGCGATGACT TGTTTCAAGC CAGCATTGAA
GATCTTTACC CGACAGTACT AGGAATTAGC CAACTACAGG ACAAAAAAAG CCTGCGCTTA
TTTTGCCGTA TCGATCATTA CCAGCGTTTT GTTTCCTGCT TGGTCTATAT TCCGCGTGAT
AAATTCAATA CCGAACTTCG CATCAAGGTA CAGAACGTCC TAAAAGAAGC TTATGGTGGT
ACATCTTCAG GCTTTACAAC GGAGTTTAAT GAATCTGAAC ATGCCCGCGT CCATGTGCAT
GTCCGTACAG TGCCAGGTCA AGTGCATGAG GTGGATACCG CTGCGCTCCA AGCCAAGCTG
TCCTTTTTGA TGCAGTCGTG GAGTGATAAT TATCAAAAAA TGCTGCTGGA TAATGTCGGT
GAGCAGCATG CCAATGCTCT GACGCGCAGA TTTTTAAGTT ATATCCCTGC CGCTTACCAA
GAGCGATTCG ATGCACGTAC TGCCGTTGAA GATACCAAGC GTTTGGCTGG ACTTAGCGAT
GAGCAGCCGA TGATTTGGCA CTTGTATCAA TCGACAGGTG ACGCAAGCAA TCAGTTGCAC
TTAAAGCTAT ATGGTCGTCA AAAAGCAGTT ATCTTATCTA AAGTCTTACC CGTACTAGAG
AACTTCGGGG TATCAGTTAT CTCAGCGCAG ACCTATGAGT TTGATTTACC TGAGCAACCT
ATTTGGATGC AGGAGTATGA GCTGGTCTTA GAGCACGTTG ATACCATTGA TATGCAAGTG
GTGCGTGCAC AATTTGAGGA CAGCTTAAAG CAAATTTGGG CAGGACAGGT GGAGAGTGAT
TCGCTTAACG AATTGGTATT GACCACCAAG TTAGATACTT ATGATGTGGT GGTACTGCGC
GCCTTGTCAC GCTATATGAT GCAAGCGAAA GCACCGTTCT CAAATGTCTA TATTCAACAA
ACTATGGTCA AAAACAGTGA CATCAGTGTC GCATTAGGCA GTTTATTTGA TGCACGAATG
AATCCTAACT ATAGTGAAGA GGAACGTACC AGCAAAACCA GCCAGATTCG AGCACAGATT
ACCACCGCAT TAGCAGGTGT CAGTAGCTTG GATGAAGATC GTATCTTCCG CTGGTACTTG
GATTTAATTA ACGCCATGGT CCGTACCAAC TTTTATCAAA GAGAGGCGAA TGGGCAGCGT
AAAGATCGTT TGTCCTTTAA ATTTTTGGCA GCAGATATTC CAAATTTGCC AAAACCTAAG
CCGATGTTTG AGATATTTGT CTATTCACCA CGCGTTGAAG CAGTGCATTT GCGCGGTGGT
AAAGTCGCTC GCGGCGGGCT GCGCTGGTCT GATCGTATGG AAGATTTCCG TACTGAAGTA
CTTGGTCTGG TTAAAGCACA AATGGTCAAA AATGCCGTTA TCGTACCGGT TGGCTCAAAA
GGCGGTTTTA TCGTTAAAAC CAAAACGATG GCGGATGGTC GTGATGTATT CCAAGCTGAA
GGTATTGCCT GCTATCAGAC ATTCCTTCGC GGTATGCTTG ATGTGACCGA CAATATCGTC
GATGGTGCGA TTGTCCCGCC AGCCAATACC GTACGTCATG ATGAAGATGA TCCGTATTTG
GTGGTCGCTG CCGATAAAGG TACGGCAACC TTTTCTGATA TCGCTAATGC TTTGTCTGCT
GAATATAACT TTTGGCTAGA TGATGCCTTT GCTTCTGGTG GCTCGGTTGG TTATGACCAC
AAAGCGATGG GCATTACCGC CCGCGGTGGT TGGGAGTCGG TCAAGCGCCA CTTCCGTATG
CGCGGCATGG ACATTCAAAA TCGCGATGAT TTTACCGTCG TGGCGATTGG CGACATGAGT
GGTGACGTCT TTGGTAACGG TATGCTCAGA TCAACCCATA CCAAACTGGT TGCTGCCTTT
AACCATCTGC ATATTTTTAT TGACCCAAAT CCAGATACAG CAGCGTCTTT TGCAGAACGC
GAGCGCTTAT TTAACTTACC TCGCTCGTCA TGGGAAGATT ATAACCAGTC TCTCATTAGC
CAAGGCGGTG GTATCTTCTC ACGTCAAGAC AAGACCATTG CTATCAGCCC TGAAATGAAA
GCGGTTTTTG ATATCTCAGA TGACAGCTTA GCACCAAATG ACTTTATCAG CGCGTTGCTA
AAATCGCCAG TAGATCTCAT TTGGAATGGT GGTATCGGTA CTTATGTGAA AAGTAGTGAG
GAGAGTCATG CTGACGTAGG TGATCGTGCC AATGATGCCG TACGTGTCAA CGGTGGCGAA
TTACGTGCGG CTATCGTCGG TGAAGGCGGT AACCTAGGCC TCACGCAACG AGGTCGTATC
GAGTATGCCC AAACTGGTGG ACGTATTTAT ACTGATGCTA TCGATAACTC AGGCGGCGTC
AACTGCTCAG ATCATGAAGT CAATATCAAA ATCTTACTTG GCAAAGTGGT TGAGCAAGGT
GATATGACGT TGAAGCAGCG TAATGAGCTT CTTGAAAGCA TGACCGAGAC CATTAGCGAA
TTGGTGCTGC GTCAAAACTA TCTGCAACCG CAAGCAATTG AGCTGAGTCA AATCCGGGCA
GCTGCAAACT TAAGCGATCA TCAGCGCTTT ATTCAGATGT TAGAAGCAGA AGGGCGTCTA
GATCGAGCGA TTGAGTATTT GCCATCAGAT GAAGAGATTG CTAAACGCCA AAAATCTGGC
ACAGGTCTAA CCAATCCTGA GCTAGCCGTT GTGATGGCTT ACGGAAAAAT GTGGGTTTAT
GACAACTTAC TGCTCTCAGA TTTACCGGAT GCGCCGTATT TCGTTAATGA ATTACGCAAA
TATTTCCCCG ATGAGCTGGC ATCAAAATTC TTTGATGAGA TGACTGAACA CCGTTTACAC
CGTGAAATCA TCAGTACGTA TATGACCAAT AGTGTGGTCA ACCGTCTGGG TATCGAAGCA
TTATTCCGTC TGCATGAAGA AACAGGACAA ACGCTTGCCA CTATCGTGCG CGGCTATGCC
ATTGCGCGTG ATGTGTTCCA TGTCTCAAAA GCATGGGAGC TACTTGAAGC ACTTGACAAT
CAAGTCGATG CCACTTTGCT GCTTGAGCTT GAACTGCGTC TGCGCGATGC ACTCGAAAAC
GGAGTAGTCT GGTTTATCAA TGCCTTTGGA CAAGATTTGC AAGTGGCCGA TATGATTAGC
CGTTTTGAAG ACAGTGTCGA AAAGCTAACC AAATCAGGCG GATTTATTGA GCAGCAATTT
TCACAATACT TGCAAGCCGA TACCACAAGC TTGATAGAAG ATGGTCTTTC TATCAATGAT
GCATCGATGT TTGCAATGTT GCCATACCAT GTTGATGCCC TTGATGCTGC CCTCTTAGCA
GAGCAGTACG AACGTCCGGT TGATGAGATT GCCACTTTAT ACTTTGAGGC CTATCACGTT
TTGCAGCTTG ATTGGATGAT TGATAATATT GCTATCTTGC CGCAGCAAGA CCACTGGGAT
CGCCGTGCCC GTCATGCGCT TGCCAATGAT GTATCGCGCA GCTTACGTAT GCTGATGGAG
ACGTTATTGA CTCAACCTGA TGCCATTCAA GCCTTCAGTG ATTGGAAATC GCGTCATGCT
AGCCAGCTTG CCGGCGTTAC TGCTGAGATG AACAAACTTG ATAGCAATAA TGATAGCCAA
ATCAGCCTCT CAACGTTATC CGTCTTGATG AGTGAGTTAA GTGGTTTAGT GACCAAATAG
|
|---|
| Protein sequence | MPNSLNIAKE RISQISDIAT SYVQADKSLF DHFIHSYYQP LHQETAKDIS NADLAGMALH
HFTLLKAYDR SHPQLAILNP IAEEQHFHSS HTVIQIVAYD RPFLVDTLLM SLEEQGIDVH
RTYHIIVNVE RDENGAITKV ESAQESGTSH MSLIHCEISY QDNDELAALK QMLLAKVDTL
DVVVDDWQQI RAKLTDIKAE LATKTLPEVF YSQQEIQAFL DWVLDDHFIF LGYREYRLED
GHRIEVNSVG NTANQDDRSD LDLFSIGNSG LGLLRGGSED QLSKSFDELP SNLKRLLTAP
QVLVLSKSSR VSPVHRPVYM DFLGIHKFDD NGKLIGEHRF IGLFTAQAYQ LSVQQIPLLR
EKSNKIMAMA KLPRDGHAYH KMMHIINTLP RDDLFQASIE DLYPTVLGIS QLQDKKSLRL
FCRIDHYQRF VSCLVYIPRD KFNTELRIKV QNVLKEAYGG TSSGFTTEFN ESEHARVHVH
VRTVPGQVHE VDTAALQAKL SFLMQSWSDN YQKMLLDNVG EQHANALTRR FLSYIPAAYQ
ERFDARTAVE DTKRLAGLSD EQPMIWHLYQ STGDASNQLH LKLYGRQKAV ILSKVLPVLE
NFGVSVISAQ TYEFDLPEQP IWMQEYELVL EHVDTIDMQV VRAQFEDSLK QIWAGQVESD
SLNELVLTTK LDTYDVVVLR ALSRYMMQAK APFSNVYIQQ TMVKNSDISV ALGSLFDARM
NPNYSEEERT SKTSQIRAQI TTALAGVSSL DEDRIFRWYL DLINAMVRTN FYQREANGQR
KDRLSFKFLA ADIPNLPKPK PMFEIFVYSP RVEAVHLRGG KVARGGLRWS DRMEDFRTEV
LGLVKAQMVK NAVIVPVGSK GGFIVKTKTM ADGRDVFQAE GIACYQTFLR GMLDVTDNIV
DGAIVPPANT VRHDEDDPYL VVAADKGTAT FSDIANALSA EYNFWLDDAF ASGGSVGYDH
KAMGITARGG WESVKRHFRM RGMDIQNRDD FTVVAIGDMS GDVFGNGMLR STHTKLVAAF
NHLHIFIDPN PDTAASFAER ERLFNLPRSS WEDYNQSLIS QGGGIFSRQD KTIAISPEMK
AVFDISDDSL APNDFISALL KSPVDLIWNG GIGTYVKSSE ESHADVGDRA NDAVRVNGGE
LRAAIVGEGG NLGLTQRGRI EYAQTGGRIY TDAIDNSGGV NCSDHEVNIK ILLGKVVEQG
DMTLKQRNEL LESMTETISE LVLRQNYLQP QAIELSQIRA AANLSDHQRF IQMLEAEGRL
DRAIEYLPSD EEIAKRQKSG TGLTNPELAV VMAYGKMWVY DNLLLSDLPD APYFVNELRK
YFPDELASKF FDEMTEHRLH REIISTYMTN SVVNRLGIEA LFRLHEETGQ TLATIVRGYA
IARDVFHVSK AWELLEALDN QVDATLLLEL ELRLRDALEN GVVWFINAFG QDLQVADMIS
RFEDSVEKLT KSGGFIEQQF SQYLQADTTS LIEDGLSIND ASMFAMLPYH VDALDAALLA
EQYERPVDEI ATLYFEAYHV LQLDWMIDNI AILPQQDHWD RRARHALAND VSRSLRMLME
TLLTQPDAIQ AFSDWKSRHA SQLAGVTAEM NKLDSNNDSQ ISLSTLSVLM SELSGLVTK
|
|---|
| |