Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1281 |
Symbol | |
ID | 4033921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 1556811 |
End bp | 1558910 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637973746 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_580546 |
Protein GI | 93006109 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTAA TTATGTCTCA CCATCAACCT AAACCCTTAG TGACTGCGGT CCGTGCTCAA TTATTCCTAG CCATGATGAC GACTGGTCTA ACCATGGTGG TGAGTCAACA GGTTGCTGCT CAAGAGACAG CTATACAGCC ATTAACAACA CTGCCATCAA CGACGCTAGC GCCGATTGTG GTCATGGCTA AAACCTATGA AGGCTATGCT GCTTATGCTC CAACGTCAGG GACCAAGACG CAGACCGAGT GGTTAGATGT GCCGCAGTCA GTATCGGTAG TAACTAAAAC GGAGCTAGAG GATAGAGGCG CGGTGCGCGT GATGGATGCT ATGAAAGGCG TCGCCGGTTT GAATAACACG CTTGGCGAAG GTAGCCGAGA CGAGTTTGTG CTGCGTGGAT TCAATGGTTT AAACGATGTC TATAGCGATG GTATGCGTGA TGATGGCAAA TTGCAGTCCT ATCGCAGCCT CGCCAATGTA GAGCGCGTAG AGGTGGTAAA AGGTCCAGCG GGCGCGCTGT ATGGGCGTGG TAGTGCAGGT GGTATTATCA ACCTCGTCAG TAAAAAAGCA GAAGGCGATG ACTTCGATAA GGTGCAAGCG CAAGTGGGTA GCGATGGCTT AGCCGTGGCG CGCGTCGATA GCTCGCATAA ATTATCAGAT ACCGTCAATG CCCGTATCAA TGCCGAATAT CGCCGCAGTG ACTCCTATGT CGATCATATC GATTCAAATG ATGTCTTTAT CGCACCGACA GTTCGCTGGC AGCCGACTGA CCAGCAAACG CTAGATTTCT CCCTCGATTT TATGCGCCAG CACCTTGTAC CTTATCGCGG TGTTCCGTCC AAAGATGGTA AGCCTGTTGA TGTACCTCCT AATACTTTTT ATGGCGGCAC CAATGATTAC CAAGATTCAG ACACTTGGCA TGCCAATGTC AATCATGAGT TTGATATCAA TGATGGTCTT AAATGGACCA ATCGAGCTTC ATACAGCAAT ATTACTTTAG AGCAAAAAGG CACCCGTCAA TCATCTGCTG ATGTGGTCAA TGATAAGGTT GAACGTACTG TCAATAATTT TGGTTATGAT CCACGCACCA GCAAAACCTT ACAGTCTGAG CTTGCTTGGA ATAAGGGCAG TCATGAGCTG CTATTTGGTG CCGATTATAA TGACATTGAC ATTGACTTAA CTCTTGCGAC TGACAAAAAT GTACCACCCA CATCTGCAAC CAACCCGAGC GCTGGTCCAA CGCCTAACCC AGGTTTCCCC GCATTTCGTA AAAATAGCAC CCAAAGCATC GGTGTCTTTG CCCAAGATGT CTATCATATT GGCGACTGGT CACTTGTCGG CAACGTTCGC TATGACAATA TGCGCCTGAG TCAAAACGCT AATGGTAAGG ACAGTGAGCT TAACGACGAC AAATTCAGCT ACCGAACAGG CGTCGTCTAT AAGTTTAATG ACGCCACCTC CGCTTATGCC ACCGTAGCGC GTTCATGGCA GCTGCCTTAT TCAGGAACGT TTATCAATCC AAAATTGGGT GCACTTTATC AGACCGACCT AAAAGAGATT GGGGTGAAAA CGTATTTAAA TAATGACGAT ATTATGCTGA ATGCTTCTCT CTATCGCATT GATAAAGAAG ACCCAAAAAC CAATGACAAT CGCGAAGTGA CGGATAAAGA TGAGTTTCGT CATCAAGGTC TAGAGTTAGA AGCTCGAGGT AAGCTAAGTG ATAATTGGGA TGTGTCGGCA GGCTATAGTT ATCTTGATGC TGAAGATAAA AAAACGGGTC TGACGCCAAA CGACGTACCG AAACAAACGT TCTCGTTATG GACCGCTTAT CAACCTGCTG ATCAATGGCG AATTGGTGGC GGGGTGAATT ATATCAGTGA CCGCTACGCT GGAGACGCAG AGGCAGTCGA ACTCGCTGGC TATACGACCG TAGATTTAAT GACTGCCTAC AGCATGGGCA AACATAATCT GCAATTGAAT CTAAATAACG CTCTGGATAA AGAATATGCG CTTGGGGCTA CCAATGGCAC CTCGGGCAAA AACCAAATTG GTCTTGGTGC GCCTAGAACG TGGCTATTAA CCTATAACTA CGAATTTTAA
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Protein sequence | MDLIMSHHQP KPLVTAVRAQ LFLAMMTTGL TMVVSQQVAA QETAIQPLTT LPSTTLAPIV VMAKTYEGYA AYAPTSGTKT QTEWLDVPQS VSVVTKTELE DRGAVRVMDA MKGVAGLNNT LGEGSRDEFV LRGFNGLNDV YSDGMRDDGK LQSYRSLANV ERVEVVKGPA GALYGRGSAG GIINLVSKKA EGDDFDKVQA QVGSDGLAVA RVDSSHKLSD TVNARINAEY RRSDSYVDHI DSNDVFIAPT VRWQPTDQQT LDFSLDFMRQ HLVPYRGVPS KDGKPVDVPP NTFYGGTNDY QDSDTWHANV NHEFDINDGL KWTNRASYSN ITLEQKGTRQ SSADVVNDKV ERTVNNFGYD PRTSKTLQSE LAWNKGSHEL LFGADYNDID IDLTLATDKN VPPTSATNPS AGPTPNPGFP AFRKNSTQSI GVFAQDVYHI GDWSLVGNVR YDNMRLSQNA NGKDSELNDD KFSYRTGVVY KFNDATSAYA TVARSWQLPY SGTFINPKLG ALYQTDLKEI GVKTYLNNDD IMLNASLYRI DKEDPKTNDN REVTDKDEFR HQGLELEARG KLSDNWDVSA GYSYLDAEDK KTGLTPNDVP KQTFSLWTAY QPADQWRIGG GVNYISDRYA GDAEAVELAG YTTVDLMTAY SMGKHNLQLN LNNALDKEYA LGATNGTSGK NQIGLGAPRT WLLTYNYEF
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