Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1271 |
Symbol | |
ID | 4033911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 1541957 |
End bp | 1542874 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637973736 |
Product | LysR family transcriptional regulator |
Protein accession | YP_580536 |
Protein GI | 93006099 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0459918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTGA GACATTTACG CTACTTTGTA GCAGTGGCAG AGGAAAAAAG TTTTAATAAG GCAGCAGAGC GTTTGTTTAT TTCACAACCA CCACTGAGCC GTCAGATAAA ACAATTAGAA GAAGAGATAG GCGTCACGCT CATTGATAGG GACAATCGCC CTTTAAAACT TACTGAAGCT GGCGAGTTTT TTTATGATCA TGCGCTGCAG ATAATAAAGA AATCAGATGA TCTGCGTGCT ATGACTTTTC GTAAGGGTAA TTTTGACAAC TCACTCTCTA TAGGTTTTGT ATCGTCGATA TTATATGGCA TATTGCCAAA AGTGATTGCG CGCTTCAGAG AGGTCTATCC AAATATAGAA ATTAAGTTAT ATGAATTAAA CTCTTGGCAG CAAACACAAA GCTTGGTAGA GGGTAAAATA GATGTTGGTT ATGGAAGGTT ATTATTCGAA GACGCTTCTA TTAGACGATT ACTATTAAGA GAGGAGAGCT TAGTTGTAGC TGTTCCTGTT AAACATCGTT TGGCACAAGA GAAGCAAAAG AGCATTCGTT TAATGGACTT AACCAATGAA AACTTATTGT TATATCCGAT GGCACCTCGT CCTAGTTTTA TTGACTATGT CTTAGAGTTG TTTGAGGCAC GCAATCTAAA AGCAAACTAT TTTACTGAGG TACGTGAGCT GCATATTGCG TTAGGGTTGG TAGCAGCAGG TGAGGGCTTG ACTATCGTAC CAAAAACGCT TGAGCATCTG CGGAGTCAGG AAGTGACTTA TATTCCTTTC GAGGACGGGC TTTTAACCTC TCCTATTGTC ATGAGTGTGA GACACTTTGA CAAGTCAGAA TTGTTAAAAA CATTGTTAGA CGTGACTTAT CAGATTTATG ATGAAGAAGG GTTTGATTAT AAGCGTGAGA CAATATGA
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Protein sequence | MELRHLRYFV AVAEEKSFNK AAERLFISQP PLSRQIKQLE EEIGVTLIDR DNRPLKLTEA GEFFYDHALQ IIKKSDDLRA MTFRKGNFDN SLSIGFVSSI LYGILPKVIA RFREVYPNIE IKLYELNSWQ QTQSLVEGKI DVGYGRLLFE DASIRRLLLR EESLVVAVPV KHRLAQEKQK SIRLMDLTNE NLLLYPMAPR PSFIDYVLEL FEARNLKANY FTEVRELHIA LGLVAAGEGL TIVPKTLEHL RSQEVTYIPF EDGLLTSPIV MSVRHFDKSE LLKTLLDVTY QIYDEEGFDY KRETI
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