| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1162 |
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| Symbol | |
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| ID | 4034142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 1408063 |
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| End bp | 1409847 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637973627 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_580427 |
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| Protein GI | 93005990 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0153276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACC AAGCAACACG CCCTGTAGCG CCTGCCGCTG CAAAGAGCAC ACCAAAAAAA
GCCGCTTTCG ATTTCCGTAA ATATCGCCCT TTTGCATTTG CGCCACTGTT GCCAGATCGC
ACATGGCCGA GCAAAACGCT AGAGAAATCA CCGATATGGG CAAGTGTGGA TCTGCGTGAT
GGCAATCAGG CATTGATTGA TCCGATGACT ATTGAACAAA AAATGCGTTT TTTTGAAACC
TTGATAGATG TGGGTTTTAA AGAAATTGAA ATAGGTTTTC CCTCAGCGGC ACAAGTCGAG
TTTGATTTTG CTCGTAAATT GATTGAAGAA AATCATGTGC CTGATGACGT GACTTTGCAG
GTATTGGTGC AGGCACGTGA GCATTTGATT GCTCGAACTT TTGAATCCTT AAAAGGCGCA
AAGCGTGCCA TCGTTCATGT TTATAACTCA ACTTGCCGTA TTCAGCGCGA AAAAGTATAT
GCTAAAGATA AAGCTGAAAT CAAAGAGATA GCTGTCACTG GTGCTAAATT ATTGGTTGAA
TATGCTGCTA AATATCCAGA AACAGAATGG GTATTCCAGT ATTCACCTGA GAGCTTTAGC
CAAACTGAGA CTGAATATGC AGTTGAAGTC TGTGATGCCG TTTGTGATGT TTGGCGACCC
GAGAACGGTC AAGAGGTAAT CTTAAACTTA CCTGCGACGG TTGAGGCGTC AATGCCCAAT
GTATTCGCTG ATCAAGTCGA GTATTTTTGT CGTAATCTTG CCAAGCGTGA GCATGTGACT
ATTAGCTTGC ATACGCATAA TGACCGAGGC TGTGCGGTGG CGGCGGCTGA GCTTGGTGTG
CTTGCTGGCG CAGATCGTAT CGAGGGCACC TTACTTGGTA ATGGCGAGCG TACCGGCAAT
ATGGATATCA TGGTCATGGC GATGAATCTG TTTAGCCAAG GTATCGATCC TGAGCTTGAT
TTTAGTAACA TGAGTGAGAT TGTACAAGTC GTTAGCGAAT GCAATAACTT GCCTCTGCAT
CCACGTCATC CCTATGTAGG TGAGCTTGTA TTTACTGCCT TTAGCGGCTC GCACCAAGAC
GCGATCAAGA AATGCCTCGA CTATAATGAG AAGCATGTGG AGAAGACAGA AAACGTTTGG
GATGTGGCAT ATTTACCAAT TGATCCTGCA CATATTGGTC GCAGCTATCA GGATGTGGTG
CGCATCAATA GCCAATCTGG TAAAGGCGGT GTGGCTTATA TCTTGCAGCG CAACTATGGC
TTCAATTTAC CACGTTGGAT GCAAATTGAC TTTAGTGGTG TGGTACAAAA ACAAGCTGAA
ACCACGGCTC GTGAATTGCA GAATGATGAA ATCTTACAGA CCTTTGAAGA CACTTATTTA
CAGCAAGGCA GTTTTGAGCT GTTAGATTAT ACGGTCAATA ATAAAGGCGG CGAAGTCTAC
TTTAACGGTC AAGTTCAGAT GAATGGCGAT ACCATCACTA TAGATGGTGA TGGTAATGGG
CCGTTATCTT CGTTTATCGA TGGATTGGCG CAGCATACAG GCAAATCAAT CCATGTCATT
AACTACGCTG AGCATGCAAT CAATCCGCAG CATAATAGCG GTGATGGTAT CAATGATGAT
AACAACAGAG ACAATAAGAC AAATGCCAAT GCTGCTGCTT ATATACAGCT AAATGTAGAT
GGTGAAGTTT ATTCAGGCAT CGGCACTTGT AGCAGCACGG TATCAGCCAT GCTAAAGGGC
GCATTGTCAG CCTTTGCTCA AGCAGTTAGT ATCGCTGCTG TTTAA
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| Protein sequence | MSDQATRPVA PAAAKSTPKK AAFDFRKYRP FAFAPLLPDR TWPSKTLEKS PIWASVDLRD
GNQALIDPMT IEQKMRFFET LIDVGFKEIE IGFPSAAQVE FDFARKLIEE NHVPDDVTLQ
VLVQAREHLI ARTFESLKGA KRAIVHVYNS TCRIQREKVY AKDKAEIKEI AVTGAKLLVE
YAAKYPETEW VFQYSPESFS QTETEYAVEV CDAVCDVWRP ENGQEVILNL PATVEASMPN
VFADQVEYFC RNLAKREHVT ISLHTHNDRG CAVAAAELGV LAGADRIEGT LLGNGERTGN
MDIMVMAMNL FSQGIDPELD FSNMSEIVQV VSECNNLPLH PRHPYVGELV FTAFSGSHQD
AIKKCLDYNE KHVEKTENVW DVAYLPIDPA HIGRSYQDVV RINSQSGKGG VAYILQRNYG
FNLPRWMQID FSGVVQKQAE TTARELQNDE ILQTFEDTYL QQGSFELLDY TVNNKGGEVY
FNGQVQMNGD TITIDGDGNG PLSSFIDGLA QHTGKSIHVI NYAEHAINPQ HNSGDGINDD
NNRDNKTNAN AAAYIQLNVD GEVYSGIGTC SSTVSAMLKG ALSAFAQAVS IAAV
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