| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1161 |
|---|
| Symbol | |
|---|
| ID | 4034141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1407357 |
|---|
| End bp | 1407845 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637973626 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_580426 |
|---|
| Protein GI | 93005989 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.012634 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACATG CTCATTCTAA TCAGCTGTTA ATTGCAGATA TTGATGACAC AGATAAACGC
TTATTGCGCT TATTACAGAC CGATGCACGT ATGAGCATTA CTGAGCTTGC TGAGCGCGTT
AATCTCTCGG CAACCCCTTG TGCGCGCCGT ATTAAGCGCT TAGAAGATAG TGACGTTATC
ACCGGTTATC ATACTCAAAC CGATGCCCAA AAACTTGGCT ATCCCTTGGC AGTTTTCATT
GCTATCAGTA TGGACCGTCA CACGGCCGAC CGTTTTGAGC AGTTTGAGCG CAAGGTTAAA
AGCTTCGATG AAGTCATCAG CTGTAGTATC GTCACTGGTC GCTCCGAGGA CTACCTGATT
AAAGTACGCG TACGGGATAT GGCTCACTAT GAGGAATTTT TATTGCATCG GTTAAATCGT
ATCGAAGGCG TGGCACAAGT CCATACCAGC TTTGAGCTGC GAGAAGTATT CAGCCGCAGT
ATGGTTTAA
|
|---|
| Protein sequence | MQHAHSNQLL IADIDDTDKR LLRLLQTDAR MSITELAERV NLSATPCARR IKRLEDSDVI
TGYHTQTDAQ KLGYPLAVFI AISMDRHTAD RFEQFERKVK SFDEVISCSI VTGRSEDYLI
KVRVRDMAHY EEFLLHRLNR IEGVAQVHTS FELREVFSRS MV
|
|---|
| |