Gene Pcryo_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1114 
Symbol 
ID4033657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1343703 
End bp1344521 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content44% 
IMG OID637973579 
Producthypothetical protein 
Protein accessionYP_580379 
Protein GI93005942 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00602952 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0178129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC ACGATGTCTT AATCACATCA TCAAATACTA TCATTACTGC ACACTCCTTA 
ACTGAATTTT GCGATGATTA CTTATCAGCG AATGCCTTTA AAGATTATGC ACCGAATGGT
CTACAAGTAG ATGGCGGTCG GCCTATTAAG CGTATTGTCA CTGGTGTGAC TGCCTGTGAA
GCATTGATTG ATGCCGCCAT TGCAGATAAT GCTGATGCAA TCATGGTACA TCACGGCTAT
TTTTGGAAAG GTGAACCTGC TCCATTGACT GGTATGAAAG GTCAGCGTAT TCGCAAGCTT
ATGCAACATG GTATCTCCTT GATCGGCTAT CACCTACCAC TCGATGCCCA TCCCATCATT
GGTAACAATG CCACATTGGC GGCGGCGTTA GACATGACCA TCATCGAGGC ACTGTATCCT
GCTGAGACTC ATCCGGTTGG TAATATTGCC ATTTGCACCG TACAGAGTGC TCAAAGCCTT
ATCGCTCAAA TTACTCAAGC ATTGGGGCGC ATGCCATTAC ATATTGCCGC TGAGTATAAC
GTCGATACTC ATACCAGTAA TAGGTTAATT GAACGGATTG GTATCTGTAC GGGCGGCGCA
CAAGATATGA TTGAGCAAGC ATCATTAATG GGCTGTGATG CGTTTATTTC TGGTGAAATA
TCAGAACGTA CGACTCATAT TGCCCGTGAG CTTGGCATTG ATTATTTTGC TTGCGGACAT
CATGCAACAG AACGCGGCGG CATTGAAGCT TTAGGTAGGA TTGTTGCTCA ACAGTTTGAC
TTACCAGTGA CATTTATCGA TATCGATAAT CCTGCTTAA
 
Protein sequence
MSTHDVLITS SNTIITAHSL TEFCDDYLSA NAFKDYAPNG LQVDGGRPIK RIVTGVTACE 
ALIDAAIADN ADAIMVHHGY FWKGEPAPLT GMKGQRIRKL MQHGISLIGY HLPLDAHPII
GNNATLAAAL DMTIIEALYP AETHPVGNIA ICTVQSAQSL IAQITQALGR MPLHIAAEYN
VDTHTSNRLI ERIGICTGGA QDMIEQASLM GCDAFISGEI SERTTHIARE LGIDYFACGH
HATERGGIEA LGRIVAQQFD LPVTFIDIDN PA