| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1077 |
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| Symbol | |
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| ID | 4034686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 1296658 |
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| End bp | 1298706 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637973542 |
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| Product | choline/carnitine/betaine transport |
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| Protein accession | YP_580342 |
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| Protein GI | 93005905 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.892042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.109945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACA AATCCTCCCG TTCCACTATT CTTTTGCCCG TCTTCGTGCC GGCAGCAGCC
ATTATGCTGC TATTAGTGAT TGGTACTGCC ATTAATCCTG AGTCTGCTGG GGAACTATTT
AGCACCGTTC TGAATTTTAC CACTGAGACT TTCGGCTGGT TCTATATGTT AGCAGTCGCT
ATATTTTTGA TGTTTATCCT TGTCTTGGCG TTTTCGTCTT ATGGCAGTAT TAAACTGGGA
CCAGATCATG CTCAGGCTGA GTATAATTTT CTTGAGTGGT TTGCCATGCT GTTTTCTGCA
GGGTATGGGA TTGCTTTACT ATTTTACGGC GTAGCAGAGC CAGTCATACA CTTTGCCAGT
CCGCCACTCT CAACGCCGCA GACTATTGAG GCCGCAAAAG AAGCAATGCA AATTGCCTAT
TTTCACTGGG GTTTTCATAT TTGGGCGATC TATGGCGTGG TTGGTCTGTC ACTGGCATAT
TTCTCTTTTC GTCATGGCTT GCCCTTGTCA ATGCGCTCAA CACTATATCC ACTCATTGGT
GATAAAATTT ATGGTCCGAT TGGACATACT GTTGATGTGT TTGCCATTGT GGGCACGATG
TTTGGTATCG CAACCAGTTT GGGGATTTCT GTATCACAGA TCAATGCCGG GTTAAATTAT
CTATTACCAA ATACGATACC TGTTAGTATT ACAGTTCAGG TGATTATCAT TGCGCTGGTG
ACACTAGCAG CTTTGGCATC TGTTCTCGCT GGCATGGATA AAGGGGTAAA GCGACTCTCA
ATTTTGAACA TGATGTTAGC AACGGGGCTG ATGCTGTTTG TTTTTATCGT GGGTCCAACC
ATCTTTATTC TAAACGCCTT TATGGAAAAC ACGGGCAGCT ATTTAGGCAA TATTGTTGAG
CGTACTTTTA GTTTACAGGC TTATCAATCG AGTGATTGGA TCGGCAGTTG GACACTCTTT
ATCTTTGCAT GGACGATTGC TTGGGCACCC TTTGTCGGAT TGTTTATTGC CAAGATTAGT
CGGGGTCGTA CTATCCGTGA GTTTGTATTA GGCGTGATGT TAGTACCAAC CTTCTTTACA
TTCTTTTGGT TCGCGGTTTT TGGTGATACA GCGCTCCATA TGATTATGGT TGATGGCTAC
GATGCACTCA TTACTGAAGT GCAGAACAAC CAAGCAATTG CGTTATTTAA ATTATTAGAG
AACTTGCCTT TTACTCAGAT AGTGTCGTCA TTAACAGTAC TATTAATTAT TACCTTTTTT
GTGACCTCAT CAGATTCAGG GTCGTTGGTG ATTGACTCTC TTGCAGCGGG TGGACGCAGT
GATACGCCAT GGTGGCAACG TACCTTTTGG GTAGTGACTG AAGGGGCAGT TGCCGCGGCT
TTACTGGTAG CTGGTGGACT GACAGCATTG CAGACTGCTG CTATTATCAG CGCCTTACCC
TTTGCCGTTA TTATATTGAT TTCGATATTT GGCATGTGGC GAGCGCTACG TATTGAAGGT
CATCGTAACC AGAGTTTAGG TAACGATAAC CATTTGCCGC CGCATCTACT GAAACTAGAG
GCTTGGCGCG AGCGTATTGA TTATATGACT GAGCAGCCAA CACGCGATAA AGTGCTTAGT
TATATCAGAG GAACAATTTT ATCTTCTATG AACGAAGTGG CTGAGAAGTT CGCCGATACA
GGTTGGTTAC CTGATGTGAA TTATGATGAG ATCAATAACC GCGCTGTATT AGAATTGAGA
AGTGGCGATA ATGTGGAGTT CTGGTACGAG GTTCGCTTAT CAGAGCATGA TATTCCTGAT
TATTATACGG AAGATATGGC AAACAAATTG CCGCAAGAGC ACCATTACCG TGCTGAAGTG
TATTTGCGCC GTGGTGGTCA GACCTATGAT TTATATGGTT ATGAATCAGT GTCGATTATT
AATGACATTA TCGATCAGTT TGAGAAATAT CTACACTTTG TCAATGTTTC ACCAGATATT
CTACCGTGGC GTATGCAAGA GCATGATGAA GATATAACGC TTGAGCAGGG CAGTGTGTTT
GATAAATAG
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| Protein sequence | MKNKSSRSTI LLPVFVPAAA IMLLLVIGTA INPESAGELF STVLNFTTET FGWFYMLAVA
IFLMFILVLA FSSYGSIKLG PDHAQAEYNF LEWFAMLFSA GYGIALLFYG VAEPVIHFAS
PPLSTPQTIE AAKEAMQIAY FHWGFHIWAI YGVVGLSLAY FSFRHGLPLS MRSTLYPLIG
DKIYGPIGHT VDVFAIVGTM FGIATSLGIS VSQINAGLNY LLPNTIPVSI TVQVIIIALV
TLAALASVLA GMDKGVKRLS ILNMMLATGL MLFVFIVGPT IFILNAFMEN TGSYLGNIVE
RTFSLQAYQS SDWIGSWTLF IFAWTIAWAP FVGLFIAKIS RGRTIREFVL GVMLVPTFFT
FFWFAVFGDT ALHMIMVDGY DALITEVQNN QAIALFKLLE NLPFTQIVSS LTVLLIITFF
VTSSDSGSLV IDSLAAGGRS DTPWWQRTFW VVTEGAVAAA LLVAGGLTAL QTAAIISALP
FAVIILISIF GMWRALRIEG HRNQSLGNDN HLPPHLLKLE AWRERIDYMT EQPTRDKVLS
YIRGTILSSM NEVAEKFADT GWLPDVNYDE INNRAVLELR SGDNVEFWYE VRLSEHDIPD
YYTEDMANKL PQEHHYRAEV YLRRGGQTYD LYGYESVSII NDIIDQFEKY LHFVNVSPDI
LPWRMQEHDE DITLEQGSVF DK
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