| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1039 |
|---|
| Symbol | |
|---|
| ID | 4033874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1240359 |
|---|
| End bp | 1241642 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637973504 |
|---|
| Product | secretion protein HlyD |
|---|
| Protein accession | YP_580304 |
|---|
| Protein GI | 93005867 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAT CTACCAACGA ATCAGGCGAC TCGCGCAAAC TAGGTGGCTT AAATACATCG
ACTGGATCGA CCAATACTAA CGATAATCCA GCGCCCACGA ACATGGATTC TACGGTCGAT
GCAAATGATG CTGATGCGTC TAAGACTAAT ATGAATAACA GCACTGATGC CGATAGGGAC
ACCAATACTG ATACTAGCAT TGAGCCGGAG CAAACGGTGC CAAGCTATAA GCGCCAGTCA
GTAAAAGATA ATAAATCAAC AAAGATTAAA AAGGCGATTT TGGCGCTGGT GATTTTAGTT
ATTTTGGGTG TGATTGCTTA TGGTTTATAC AAGAGCAATC AGCATAGCGA GTCGCAAATT
ATTACCCTCC AAGGGCAAAT GCAAATGCAG CAAACGTCTA TCGCGGCAAA AGTACCGGGA
CGTATTGCAA AAATATTAGT CACAGAAGGT GATGCCGTAA CGGTCGGTCA ACAGCTAATA
GAGATGGATT CGCCTGAGAT TAATGCAAAA ATCAATCAGG CACGTGCTGG CAAACAGATG
GCACAAAGCC AGCTAGATAA AGCAGAAAAT GGGGCGCGCC CGCAAGAAAT CGCTCAAGCA
AAAGCAGCGT GGCAAGCTCA TAAAGCGGCA TCCGACTTGG CAGAAAACAC TTATCAGCGT
GTTAATCGTC TGTATGAAGA AGGACTGATG GCGCGGCAAA AGCGTGATGA AGCCTATGCA
CAATATTTGG CAACTCAAGA TCAAACCGAA GCAGCACGCT TACAGTATGA GTTAGCGATG
GAAGGCGCAC GTAGTGAAGA TAAGTCAGCG GCGACTGCAC AAGTTGCGCA AGTCGATGCG
CAATTAGAAG AAGCATTGGT AGCGAAAGAA GAAGCCAACT TAAAAAGCCC AATCTCTGGT
GTCGTCGATA ATGTCATCGT CAATGCAGGT GAAGTGATCG GTCAAGGTGT GCCGCTGCTA
ACCTTAGTCA ATACCAATGA TCAATGGGTC GTCTTAAATG TCACGGAAAC CTACTTAAAT
CAGTTTGCGA TTGGTCAGCG GTTCATGGGT ACTATTCCCG CTTTATCATC ACCTGAAAAG
CCTTATACCA AGCAATTCAC TGTTTATGCT ACTTCAACCT TGTCTGACTT TGCCACTTGG
CGACCGACTA ACAATGACGA TGGTTTTGAT GTTCGTACCT TTGAAGTAAA AGCCCGACCG
ACTAACCCTG ATAGACGTAT TCGCTCAGGT ATGAGCGTAG TTGTACGTCT CAATCCTGCC
CTCGTTAATC AGAACCAAGA GTAA
|
|---|
| Protein sequence | MTESTNESGD SRKLGGLNTS TGSTNTNDNP APTNMDSTVD ANDADASKTN MNNSTDADRD
TNTDTSIEPE QTVPSYKRQS VKDNKSTKIK KAILALVILV ILGVIAYGLY KSNQHSESQI
ITLQGQMQMQ QTSIAAKVPG RIAKILVTEG DAVTVGQQLI EMDSPEINAK INQARAGKQM
AQSQLDKAEN GARPQEIAQA KAAWQAHKAA SDLAENTYQR VNRLYEEGLM ARQKRDEAYA
QYLATQDQTE AARLQYELAM EGARSEDKSA ATAQVAQVDA QLEEALVAKE EANLKSPISG
VVDNVIVNAG EVIGQGVPLL TLVNTNDQWV VLNVTETYLN QFAIGQRFMG TIPALSSPEK
PYTKQFTVYA TSTLSDFATW RPTNNDDGFD VRTFEVKARP TNPDRRIRSG MSVVVRLNPA
LVNQNQE
|
|---|
| |