Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0938 |
Symbol | |
ID | 4033999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 1113443 |
End bp | 1115584 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637973401 |
Product | hypothetical protein |
Protein accession | YP_580203 |
Protein GI | 93005766 |
COG category | [S] Function unknown |
COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.102754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000027622 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCTAAACA ACAGTATTCA ACAGACTGAA ACGTGGATGG AAGAAATCTG GAAGTGGGCG GATGAGAATG ATTTATCCGA ACAAGATATA CCTCGTAATG CCAGCGACTT AATTAATCTA CAAAAATTTA GCAGTGTTGT TTATGAATCT GATAGTAGTC GAACTTTTAG GTACATAAAC CCACTACCTA AAGCTTTTTC AAACTTAAAA AAACTAAAAT ATCTTGACTT AAGCAATTCA GATTTAAAGT CAGTTCCTGC ATTTTTAATG AAATTAAATG AACTTGAAAC TCTCAAGTTA AATAATAATA AGATAAGCAT TTTACCAAAA AGTATAAATA AATTAAAAGG GCTAAAATAT TTAGACGTTA GTACTAATAT AAAAATTAAA TCTTTACCTG AGAGTATTTC TGAGTTAGAA AATTTAGAGC ACCTTAATTT AAAAAATAAC TATAATTTAA AAAAACTTCC TGATCTTATA GGCAATCTCG AAAATCTTAA TCTTTTACAC TATAGCTCTA ATTCAATAGA AATATTACCC CAAAGCATTA ATCATTTAAA AAATTTAACT AGTATAGAAA TTGGGAGCTA CTCAAAAGAT AAATTTCCAG ATTTTATCTT GAATCAAAAA AAATTATCGA ATCTAGCTTT TTACATTAAT TTTTTTGATA CATTTAATAT TTCAAATACA CTTGAAATCG TCACTCAGTT TCAATATTTA GAAAGACTAC GCCTATCAGG CCTTGATATC AAAACAATCC CTGATAACTT TAAGGATCTA AAAAATATAA AATATTTAGA CCTTGATTCA AATTACAATA TGAAAATAAA TAACTCTCTT TTTGATTTAC CTTCCTTAGA ATATTTGAAC TTACGAAATT GTAATTTAAA AAAACTATCT AAAAATATTG AAAATTTAAC CAACCTTAAG TCTCTTAACC TAGAATGTAA TGAACTCATA GAACTCCCAA GCAATATAGG AAACTTACAA CTTTTAGAAA AATTAGATAT TTATAACAAT AAAATTAAAT ATCTGCCTGA GAATATAGGA TCACTTAAAA ATTTAGTTGA TCTAATAATT ACTGATAATA AACTGAAATG TTTACCTGAC TCAATTAGCT CATTGTCAAA CTTAAGTTAT TTAGATTGTA GTTATAACAA ATTAACTACT TTACCTGACT CAATAGGTTT GATGTCAAAT CTTAAAAAAT TAGACTGTAG TTATAACGAA TTGACTACTT TACCTGACTC AATAAGCTCA TTGTCAAACT TAAGTCATTT GAATTGTAGA TCTAACAAAC TAACTACTTT ACCTGATTCC ATAAATAAGC TATGTTTTAT TGAAAAGATA TATATTGACG ATAATCCAAT CACTACATTG CCTAATAGCA TGAATGAAAT TAATAGCTTG AAAGAGTTTT GGATTCCTGT TAATGATAAT GCGCTAAGTT CACAGGTTTT AAATGTTTTA TCTCAGATGA TCAACGTTAG TATAATTGGC CTTAATGAAA ATCTTGAAAT GATCAATAAC AATGGTGAAA AAAATAATGT AGTAACGATC CAAATTAATG GCACTGGTGT AGAGACTTTT GGAGGTACTG TGGATTTTAA AACTTATCAA TATTTTGAAG ATAACGGTAT AGATCTTAAT GAATACAATC ATGATGTTAC TTTTGACTTA GATGAATTAG ATATCTCAGA TGAACATAAT TTTGGAGGAA TGGGTCTTGA ACAAACGGAT GATTTATGGC ATATAAACGG TGCATATTTA GACATTGATG ATAATGAGAT TGAAGTTATC GATGGTAATA ATTCATGTAT CTGGCAAAGC TCTTTAAGTT CGAAGGATCT AAAGGATCAA GGTGTTAAAA TAATATGCGA TGGTGATTTT GACGAAATTG TGAATGAATT ACCAACACCA TTAGCTGTTA TAGCTGGTAG GTATGTTTCA AATGGTGTCA TTTTTAAGAC CAAAATTAAA TTAACTGAAA AATTCGATGC AAGTAAACTA GTTATTTATT ATCACGAAGA CGATGGAATT GATGTTATTA AAATGATTAA ATACGACGGT AAAATAATAG AAGATGAGTC AAGTTCTTCA TATGGACAAA GACAAGAATT GTCTTGGTTT GTCATTATAT AA
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Protein sequence | MLNNSIQQTE TWMEEIWKWA DENDLSEQDI PRNASDLINL QKFSSVVYES DSSRTFRYIN PLPKAFSNLK KLKYLDLSNS DLKSVPAFLM KLNELETLKL NNNKISILPK SINKLKGLKY LDVSTNIKIK SLPESISELE NLEHLNLKNN YNLKKLPDLI GNLENLNLLH YSSNSIEILP QSINHLKNLT SIEIGSYSKD KFPDFILNQK KLSNLAFYIN FFDTFNISNT LEIVTQFQYL ERLRLSGLDI KTIPDNFKDL KNIKYLDLDS NYNMKINNSL FDLPSLEYLN LRNCNLKKLS KNIENLTNLK SLNLECNELI ELPSNIGNLQ LLEKLDIYNN KIKYLPENIG SLKNLVDLII TDNKLKCLPD SISSLSNLSY LDCSYNKLTT LPDSIGLMSN LKKLDCSYNE LTTLPDSISS LSNLSHLNCR SNKLTTLPDS INKLCFIEKI YIDDNPITTL PNSMNEINSL KEFWIPVNDN ALSSQVLNVL SQMINVSIIG LNENLEMINN NGEKNNVVTI QINGTGVETF GGTVDFKTYQ YFEDNGIDLN EYNHDVTFDL DELDISDEHN FGGMGLEQTD DLWHINGAYL DIDDNEIEVI DGNNSCIWQS SLSSKDLKDQ GVKIICDGDF DEIVNELPTP LAVIAGRYVS NGVIFKTKIK LTEKFDASKL VIYYHEDDGI DVIKMIKYDG KIIEDESSSS YGQRQELSWF VII
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