Gene Pcryo_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0938 
Symbol 
ID4033999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1113443 
End bp1115584 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content28% 
IMG OID637973401 
Producthypothetical protein 
Protein accessionYP_580203 
Protein GI93005766 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.102754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000027622 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCTAAACA ACAGTATTCA ACAGACTGAA ACGTGGATGG AAGAAATCTG GAAGTGGGCG 
GATGAGAATG ATTTATCCGA ACAAGATATA CCTCGTAATG CCAGCGACTT AATTAATCTA
CAAAAATTTA GCAGTGTTGT TTATGAATCT GATAGTAGTC GAACTTTTAG GTACATAAAC
CCACTACCTA AAGCTTTTTC AAACTTAAAA AAACTAAAAT ATCTTGACTT AAGCAATTCA
GATTTAAAGT CAGTTCCTGC ATTTTTAATG AAATTAAATG AACTTGAAAC TCTCAAGTTA
AATAATAATA AGATAAGCAT TTTACCAAAA AGTATAAATA AATTAAAAGG GCTAAAATAT
TTAGACGTTA GTACTAATAT AAAAATTAAA TCTTTACCTG AGAGTATTTC TGAGTTAGAA
AATTTAGAGC ACCTTAATTT AAAAAATAAC TATAATTTAA AAAAACTTCC TGATCTTATA
GGCAATCTCG AAAATCTTAA TCTTTTACAC TATAGCTCTA ATTCAATAGA AATATTACCC
CAAAGCATTA ATCATTTAAA AAATTTAACT AGTATAGAAA TTGGGAGCTA CTCAAAAGAT
AAATTTCCAG ATTTTATCTT GAATCAAAAA AAATTATCGA ATCTAGCTTT TTACATTAAT
TTTTTTGATA CATTTAATAT TTCAAATACA CTTGAAATCG TCACTCAGTT TCAATATTTA
GAAAGACTAC GCCTATCAGG CCTTGATATC AAAACAATCC CTGATAACTT TAAGGATCTA
AAAAATATAA AATATTTAGA CCTTGATTCA AATTACAATA TGAAAATAAA TAACTCTCTT
TTTGATTTAC CTTCCTTAGA ATATTTGAAC TTACGAAATT GTAATTTAAA AAAACTATCT
AAAAATATTG AAAATTTAAC CAACCTTAAG TCTCTTAACC TAGAATGTAA TGAACTCATA
GAACTCCCAA GCAATATAGG AAACTTACAA CTTTTAGAAA AATTAGATAT TTATAACAAT
AAAATTAAAT ATCTGCCTGA GAATATAGGA TCACTTAAAA ATTTAGTTGA TCTAATAATT
ACTGATAATA AACTGAAATG TTTACCTGAC TCAATTAGCT CATTGTCAAA CTTAAGTTAT
TTAGATTGTA GTTATAACAA ATTAACTACT TTACCTGACT CAATAGGTTT GATGTCAAAT
CTTAAAAAAT TAGACTGTAG TTATAACGAA TTGACTACTT TACCTGACTC AATAAGCTCA
TTGTCAAACT TAAGTCATTT GAATTGTAGA TCTAACAAAC TAACTACTTT ACCTGATTCC
ATAAATAAGC TATGTTTTAT TGAAAAGATA TATATTGACG ATAATCCAAT CACTACATTG
CCTAATAGCA TGAATGAAAT TAATAGCTTG AAAGAGTTTT GGATTCCTGT TAATGATAAT
GCGCTAAGTT CACAGGTTTT AAATGTTTTA TCTCAGATGA TCAACGTTAG TATAATTGGC
CTTAATGAAA ATCTTGAAAT GATCAATAAC AATGGTGAAA AAAATAATGT AGTAACGATC
CAAATTAATG GCACTGGTGT AGAGACTTTT GGAGGTACTG TGGATTTTAA AACTTATCAA
TATTTTGAAG ATAACGGTAT AGATCTTAAT GAATACAATC ATGATGTTAC TTTTGACTTA
GATGAATTAG ATATCTCAGA TGAACATAAT TTTGGAGGAA TGGGTCTTGA ACAAACGGAT
GATTTATGGC ATATAAACGG TGCATATTTA GACATTGATG ATAATGAGAT TGAAGTTATC
GATGGTAATA ATTCATGTAT CTGGCAAAGC TCTTTAAGTT CGAAGGATCT AAAGGATCAA
GGTGTTAAAA TAATATGCGA TGGTGATTTT GACGAAATTG TGAATGAATT ACCAACACCA
TTAGCTGTTA TAGCTGGTAG GTATGTTTCA AATGGTGTCA TTTTTAAGAC CAAAATTAAA
TTAACTGAAA AATTCGATGC AAGTAAACTA GTTATTTATT ATCACGAAGA CGATGGAATT
GATGTTATTA AAATGATTAA ATACGACGGT AAAATAATAG AAGATGAGTC AAGTTCTTCA
TATGGACAAA GACAAGAATT GTCTTGGTTT GTCATTATAT AA
 
Protein sequence
MLNNSIQQTE TWMEEIWKWA DENDLSEQDI PRNASDLINL QKFSSVVYES DSSRTFRYIN 
PLPKAFSNLK KLKYLDLSNS DLKSVPAFLM KLNELETLKL NNNKISILPK SINKLKGLKY
LDVSTNIKIK SLPESISELE NLEHLNLKNN YNLKKLPDLI GNLENLNLLH YSSNSIEILP
QSINHLKNLT SIEIGSYSKD KFPDFILNQK KLSNLAFYIN FFDTFNISNT LEIVTQFQYL
ERLRLSGLDI KTIPDNFKDL KNIKYLDLDS NYNMKINNSL FDLPSLEYLN LRNCNLKKLS
KNIENLTNLK SLNLECNELI ELPSNIGNLQ LLEKLDIYNN KIKYLPENIG SLKNLVDLII
TDNKLKCLPD SISSLSNLSY LDCSYNKLTT LPDSIGLMSN LKKLDCSYNE LTTLPDSISS
LSNLSHLNCR SNKLTTLPDS INKLCFIEKI YIDDNPITTL PNSMNEINSL KEFWIPVNDN
ALSSQVLNVL SQMINVSIIG LNENLEMINN NGEKNNVVTI QINGTGVETF GGTVDFKTYQ
YFEDNGIDLN EYNHDVTFDL DELDISDEHN FGGMGLEQTD DLWHINGAYL DIDDNEIEVI
DGNNSCIWQS SLSSKDLKDQ GVKIICDGDF DEIVNELPTP LAVIAGRYVS NGVIFKTKIK
LTEKFDASKL VIYYHEDDGI DVIKMIKYDG KIIEDESSSS YGQRQELSWF VII