Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0848 |
Symbol | |
ID | 4035169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 1004281 |
End bp | 1005066 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637973311 |
Product | integrase catalytic subunit |
Protein accession | YP_580113 |
Protein GI | 93005676 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.283499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAA GTGTCTTTTA CTACCATAGG TGTCAGTTTG ACGTTAAAGA CAAATATGGA GACTTAAAAC AGCGTATTAC TGAGCTTTAC CATCAGCATA AAGGCAGGTA TGGTTATCGT AGAGTCACGG CTGCATTAAA GCAGCTAGAT TGTCATCATA ACCATAAGCT CATCGCTAAG CTTATGCATG ACATGAAGCT TAGCGCAAAG ATAAGACGTC AGAAGTATCG CTCCTATAAA GGACAACAAG GTAAGATTGC GAAGAACTAT TTAAAACGCC AGTTTCATGC AGATAAACCA AATAAGCGCT GGCTGACCGA TATTACTGAG TTTAAGGTGG GTGATGATAA GCTGTATTTG TCACCCATAC TTGATTGTTA TAACAATGAG ATTGTCAGTT ATACACTCTC AAAGAGACCC ACTTATGACT TAGTTGGCAA GATGCTAGAG GATGCTTTGG CAAAGACGAA AGCGTGCCGT GATAACAAGT TAATGCTGCA CTCTGATCAA GGATGGCATT ATCAAATGAG ACTGTTTGGA CAGGTGCTGA AACAGCATGG TATTAAGCAA AGTATGAGCA GAAAAGGCAA CTGTTTGGAT AATGCGCTCA TGGAGGGGTT CTTTGGTACC CTAAAGTGTG AGACGATTTA TATTGAAAAG CCTAATTCGA TTGAAGGTTT AGAGAAACAG ATTCATGAGT ATATTCACTA CTATAATCAT GAAAGAATTC AACTCAAACT AAAAGGACTG AGTCCTGTTA AGTACAGAAC TCAGTCCTTG ATATAA
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Protein sequence | MAKSVFYYHR CQFDVKDKYG DLKQRITELY HQHKGRYGYR RVTAALKQLD CHHNHKLIAK LMHDMKLSAK IRRQKYRSYK GQQGKIAKNY LKRQFHADKP NKRWLTDITE FKVGDDKLYL SPILDCYNNE IVSYTLSKRP TYDLVGKMLE DALAKTKACR DNKLMLHSDQ GWHYQMRLFG QVLKQHGIKQ SMSRKGNCLD NALMEGFFGT LKCETIYIEK PNSIEGLEKQ IHEYIHYYNH ERIQLKLKGL SPVKYRTQSL I
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