| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0845 |
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| Symbol | |
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| ID | 4035166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 1001091 |
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| End bp | 1002746 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637973308 |
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| Product | choline/carnitine/betaine transport |
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| Protein accession | YP_580110 |
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| Protein GI | 93005673 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.626779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCATG TAAAAGTTGG CCGCTTGGGC CCTTTTCCAC GGGTAAGTAA ACCTGTGTTC
TTAACTTCAG CACTATTAAT TCTGGTGTTT ATCATCTTTG GTGCTTTTTT TAATGAGCAA
GCAGAACTGG TATTTGGTCA CGCAAAAGCA TTCGTGTCTT TGCGCTTTGG CTGGTTCTTT
ATTGTGGTGG TTAACTTAAC GCTAGTGATG AGTATTTATA TGATATTCAG TCGCTATGGC
GATATCAGGC TTGGTCATCA GAACGAGAAG CCCGAGTATA ATATAGTCTC CTGGATTGGC
ATGCTGTTTT CAGCTGGCAT CGGTATTGGA CTGCTCTATT GGGGCACCGC TGAACCCTTG
TACCATTTTA TGGCGCCGCC ATTGGGAGAG CCCGAAACGA TCGCCGCCGC CAAGCAAGCG
ATGAATATCT CGTTCCTGCA TTATGGCTTA CATGTGTGGG CGCTCTACGG CATGGTTGCT
TTGTCATTGG CTTATTTTCA CTACCGAGTG GGTTTACCAC TGGCCATCCG CTCGACACTT
TATCCTATAT TGGGTAAGAA AATCTATGGT GGTTGGGGTC ATACGGTCGA TACGCTGGCG
GTATTTGGGA CGATGTTTGG GGTAGTGACC ACGTTAGGTC TTGGGGTATT GCAGATTAAC
TCAGGTCTTG AGACGTTATT TGGTATTCCC AATAATATTA CAGTGCAAAT TATATTGATT
GCCTTAATCA CTATGCTGGC TGGTCTATCT CTGTTTATGG GATTAGATAA AGGGATTAAG
CGCTTAAGTG ATACCAATAT ATTATTTACT GTGATATTGC TAAGCTTTGT GATTATTTTA
GGACCGACTC AGTTTATTAT AAATAGCTTT GTAGAGAACA TCGGCAACTA TTTACATCAG
ATTGTGCCAC TAGGTCTTTG GACAGAGTCT TATAACGGTG AAGAAAACTG GCAAGCATCA
TGGACGATTT TCTATTGGGC ATGGTGGATA AGCTGGTCGC CTTTCGTTGG GGTGTTCGTG
GCTCGTATCT CTCGTGGTCG TACGATTCGT GAATTCATAT TGGGAGTGTT GTTGATTCCT
ATTACCATAT TGTTCTTATG GTTTACCGCT TTTGGTGGTT CAGCCGTTAA TATGGAGCTA
ATGGCGGCGG CGGACCCCAA TATTATCAGT CCTGGCTTGA TCGAGGCGGT CCAAGCAGAT
ACTGGCAGTG CCATCTTTAA GTTGATGGAG TCTTATCCGC TAACATCGGC TGTGAACTTG
CTCATCGTGG TAATGATTGT TCTTTGGTTT GTCACGTCAT CGGATTCAGC CAGTTTCGTC
ATTGATATGT TGACCTCAGG TGGCGATGCT AATCCACCGA AAATTCAGCG CTTATTTTGG
GCGGGTACCG AAGGTGTCAT CGCAGCGGTA CTATTGGCAG CAGGTGGCTT GAGTGCACTA
CAAGCGGCTT CCATTGTGTC AGGTTTTCCT TTTGCGATAG TGATAGTCGT AATGATGTAT
TCGCTACTAC GTGGCTTAAG TCGTGACCGT TTGATATTGT ATCGCAATCA GCAATGGTTT
ATCACCGAGG AATCTGCTGA GCACAATTCA GCCAATGAAT TTCGTGATGA AGACTTGCTC
ACAGGTCCGC CTGATATTGA AAAGCCTGAA GGTTAA
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| Protein sequence | MDHVKVGRLG PFPRVSKPVF LTSALLILVF IIFGAFFNEQ AELVFGHAKA FVSLRFGWFF
IVVVNLTLVM SIYMIFSRYG DIRLGHQNEK PEYNIVSWIG MLFSAGIGIG LLYWGTAEPL
YHFMAPPLGE PETIAAAKQA MNISFLHYGL HVWALYGMVA LSLAYFHYRV GLPLAIRSTL
YPILGKKIYG GWGHTVDTLA VFGTMFGVVT TLGLGVLQIN SGLETLFGIP NNITVQIILI
ALITMLAGLS LFMGLDKGIK RLSDTNILFT VILLSFVIIL GPTQFIINSF VENIGNYLHQ
IVPLGLWTES YNGEENWQAS WTIFYWAWWI SWSPFVGVFV ARISRGRTIR EFILGVLLIP
ITILFLWFTA FGGSAVNMEL MAAADPNIIS PGLIEAVQAD TGSAIFKLME SYPLTSAVNL
LIVVMIVLWF VTSSDSASFV IDMLTSGGDA NPPKIQRLFW AGTEGVIAAV LLAAGGLSAL
QAASIVSGFP FAIVIVVMMY SLLRGLSRDR LILYRNQQWF ITEESAEHNS ANEFRDEDLL
TGPPDIEKPE G
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