Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0787 |
Symbol | |
ID | 4033732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 926645 |
End bp | 927880 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637973252 |
Product | LolC/E family lipoprotein releasing system, transmembrane protein |
Protein accession | YP_580054 |
Protein GI | 93005617 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000127174 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCGTC CTTTAGCGTT ATTTATCGGC TTACGGTACA CCCGAGCAGA ACGTAGTAAT GGTTTTATCT CTTTTATATC GCTGATCTCA ATGATTGGTC TGACGCTTGG CGTGGCGGTA TTGATTACCG TACTGTCGGT CATGAATGGC TTCGATCGTG AGCTAAAAAC GCGTATTTTG GGTATGGTAC CGCAAGCGAC TGTCACATCA ACTGAGATTA TCGGTGATTG GAAACAAGTC GCGGACAAGA TTAAAGAAGA TCCAGAAGTG GTTGCAGTTG CGCCTTTTAT CCAGTTGCAA GGTATGTTGA CCTCGAATGG TCAGGTAGCT GGCATCATGG TGACAGGTGT TGATCCTGAG TATGAGAAAA ACGTTTCTAT CATCAATGAG CATATGGTGG AAGGCAATAT TGATACGCTA AAGAATGGCG AGTTCGGTAT TGTGCTTGGT GAAGGTATGG TGCAATCACT AGGACTGCAA TTGGGTGACA AAGTCACTCT CGTGCTGCCA GAAGCATCGC CATCACCTGC TGGCGTGATA CCACGCTTTA AACGCTTTAC CTTGACCGGT ATATTTTCTA TCAGTCCAGA AGTAGACAGT CTCATGGCAT TCATTCCAAT GGGCGATGCG GCAAAATTAC TGCGTTTACC AGAGGGCGCC CAAGGTATCC GTATGAAGCT TCATGATATC TTTACAGCGC CAATGGCAGC ACAAAAAGCG GCTGCGATTG CGCCAGAGCA ATTATATCCT AGTGATTGGA CCCAGACGCA TGGCAATCTA TTTGGTGCTA TCCAAATGGA AAAAGCCATG GTTGGCTTGC TACTGTTCTT AATCATCCTC GTGGCAGCTT TTAATATTGT TTCAAGTTTA GTGATGCTAG TCACAGATAA AAAGGCTGAC ATTGCTATCT TAAAAACTTT TGGCGCCTCA CCGCGTCTGA TTACCCAAGT CTTTATGGTA CAAGGTGTGG TGATTGGTTT TATTGGTACC ATTGCAGGTA CGATATTGGG CGTGATATTT GCATTAACGG TCAGTGATAT TTTGGGCTTT ATTAATAATA GCTTTGGTCT AAATTTATTT GATGCCTATT TTGTGAACTA TCTACCATCG CAGCTGCGTT TGGCGGATGT GGTATTGATT ACCAGTGCGT CATTTATATT GAGCTTTTTG GCGACCATTT ATCCAGCACG CCGAGCGGCT AAAATTCAGC CTGCACAAAC GCTGCGTTAC GAGTAA
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Protein sequence | MFRPLALFIG LRYTRAERSN GFISFISLIS MIGLTLGVAV LITVLSVMNG FDRELKTRIL GMVPQATVTS TEIIGDWKQV ADKIKEDPEV VAVAPFIQLQ GMLTSNGQVA GIMVTGVDPE YEKNVSIINE HMVEGNIDTL KNGEFGIVLG EGMVQSLGLQ LGDKVTLVLP EASPSPAGVI PRFKRFTLTG IFSISPEVDS LMAFIPMGDA AKLLRLPEGA QGIRMKLHDI FTAPMAAQKA AAIAPEQLYP SDWTQTHGNL FGAIQMEKAM VGLLLFLIIL VAAFNIVSSL VMLVTDKKAD IAILKTFGAS PRLITQVFMV QGVVIGFIGT IAGTILGVIF ALTVSDILGF INNSFGLNLF DAYFVNYLPS QLRLADVVLI TSASFILSFL ATIYPARRAA KIQPAQTLRY E
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