Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0675 |
Symbol | |
ID | 4033561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 800164 |
End bp | 801903 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637973137 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_579942 |
Protein GI | 93005505 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.775979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCA CCGCGCTAGT CGTTGATGAC GAAGTAGATT TATGCCGTTT GATGCAAATC ACCCTGACCA AAATGGGTAT CAAAAGTGAT GTTGCCTATA CATTGTCGCA AGCGAAATCG TACTGGCAAG ACAATGACTA TGATTTTTGT CTAACCGATT TAAAACTCCC TGATGGTTCG GGATTAGAGT TGGTCAAACA TATCAGTGCC AGCTCCAGTA AGCCCATTGC GGTGATTACA GCGCATGGTA GTATGGATTT AGCGATTGAA GCACTAAAGC TTGGGGCTTT TGATTTCGTC AATAAACCGC TTGAGCTACC CCGCTTACGG CAATTGGTTG AAAACGCGCT AAAGGTAATA CAACAAGATT TGACTGCCAA GTCCACGCCG CAACGCTCAC CTGAACAGCA GATGCTTGAT GAGCGCCTGA TTGGTGATTC GGCGGTAATG CATCCTTTAA AAAACACGAT TTTAAAATTG GCTCGCTCAC AAGCGCCAGT ATTTTTGTCA GGGGCTTCAG GTACAGGTAA AGAAGTCGTT GCGCGGCTCA TTCATGACTT AAGCCCGCGG CGTGACGGCA GTTTTGTGCC AGTCAATTGC GGGGCGATAC CATCAGAGCT GATGGAATCA GAGTTTTTTG GTCATAAAAA AGGCAGCTTT ACAGGTGCCG TTGCGGACAA GCAAGGTCTA TTTCAGCAAG CCAATGGCGG TACTTTATTT TTAGATGAGG TAGCAGACTT GCCTTTAGCG ATGCAAGTGA AGTTGCTACG GGCTATTCAG GAGAAAACTG TACGCGCGAT TGGCGATACC AAAGAAGTGC CTGTCGATAT TCGTATCTTG TCAGCCACGC ATAAAGATTT AAACCAGCTG GTACAGACAG GGTTGTTCCG TCAGGATTTA TATTACCGCA TTAACGTGAT TGAGCTTAAA TTACCAACAT TGAATGCACG GCGCGATGAT ATACCGGTAT TAGCCACGCA TTTTTTAGCG CTGATTGCTG AAGAGTGGCA GTTGGAGTCG AAGCCTTTAT TAACTGCAGA GGCTTGCCTG CGTTTACAGC AGCATGATTT TGCGGGTAAC GTTCGTGAGC TGCGTAATGT ACTTGAACGT GCCGTTACTT TGGCTGAAAC CTCAACTATT GATATAAGCC ATCTCGGCTT ATCTGACTTA AATGTCCATC AACAGGCGCA TATGCCTCAA AAAATCAATG AAGATAACGC ATCTGATTCA ATAGAAAATA TAGATAAAGA CGATAGAGAA CCATCATCTA TCAAAAGTGT CTCGACGCAG CAAGCAAAGG CTAATCTGCA CCCTTATCGT ACGATGACTC ATCACTATGC TGCAGTGAAG CAATCTTCGA TATCCGGTAC GATATCCGAC TCATCGTCTT CCGCAATAGG AATAGAGCAG CAATCAGTGA CAGCAATGGC GGAGCGCGCT GAATCAGTAA ACAAGAACGC AAATAGTGAT AAGACCGATT CTGTAGCCAA TCTCGACAGT AGCATTGATG GCAATATTGA TATATTAAAC AGTATCGCGA TAAAAAGCAG CGTCAGTGGT CAGCTACCAG CACAAGGGTT AGAGCACTAT CTCCAAGAGC AAGAAAGACA ACTTATTATC ACTGCACTTA AGCAAACTGG CTGGAATAAA ACCCAAGCCG CTGAACTATT AGGAACCACT TTTCGATCCT TACGCTATCG TATGACCAAA CTTGAGATTG CAGAAGATCA AGCTGAATAA
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Protein sequence | MTTTALVVDD EVDLCRLMQI TLTKMGIKSD VAYTLSQAKS YWQDNDYDFC LTDLKLPDGS GLELVKHISA SSSKPIAVIT AHGSMDLAIE ALKLGAFDFV NKPLELPRLR QLVENALKVI QQDLTAKSTP QRSPEQQMLD ERLIGDSAVM HPLKNTILKL ARSQAPVFLS GASGTGKEVV ARLIHDLSPR RDGSFVPVNC GAIPSELMES EFFGHKKGSF TGAVADKQGL FQQANGGTLF LDEVADLPLA MQVKLLRAIQ EKTVRAIGDT KEVPVDIRIL SATHKDLNQL VQTGLFRQDL YYRINVIELK LPTLNARRDD IPVLATHFLA LIAEEWQLES KPLLTAEACL RLQQHDFAGN VRELRNVLER AVTLAETSTI DISHLGLSDL NVHQQAHMPQ KINEDNASDS IENIDKDDRE PSSIKSVSTQ QAKANLHPYR TMTHHYAAVK QSSISGTISD SSSSAIGIEQ QSVTAMAERA ESVNKNANSD KTDSVANLDS SIDGNIDILN SIAIKSSVSG QLPAQGLEHY LQEQERQLII TALKQTGWNK TQAAELLGTT FRSLRYRMTK LEIAEDQAE
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