Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0608 |
Symbol | |
ID | 4035656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 723132 |
End bp | 724064 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637973070 |
Product | pseudouridine synthase, Rsu |
Protein accession | YP_579875 |
Protein GI | 93005438 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.543804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.283386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGATG AAAAATTACA GAAAGCACTT GCCCGTATGG GACTTGGTTC ACGTCGTCAG ATGGAAGAAG TTATTAAAGC AGGTCGTGTG ACTGTCAATA ATGGTCCGGC AACCATTGGT GATCGTGTTG AACAAGGTGA TGAGATTCGC GTTGATGGTC GTCAGATTAA ATATACTTCT GAAAATGAGA AACGTCGTCG CGTTTTAGCT TATTACAAAC CTGAAGGCGA AGTATGCTCG GCGAATGATC CAGAAGGTCG TCCTACCGTG TTTGAGCGTT TGCCAAAGCT GACTCATGAT CGTTGGGTTA TGGTAGGTCG CTTGGATATC AACTCAACTG GTCTATTATT ATTTACTAAC GATGGTGAAA TGGCGCATCG TTTGATGCAT CCTTCTAGTG AAGTGACGCG TGAATATGCC GTACGTGTAC TGGGCGATGT TACTCCAGAT ATGGCACGAG CGATGACAAC AGGTGTCATG TTAGAAGATG GCATGGCTAA GTTCGAAGAT ATTAAGGAAG GCGGTGGTGA AGGCGTCAAC AAGTGGCATC ATGTGCAGCT TAAAGAAGGT CGTAACCGTG AAGTTCGCCG TTTATTTGAA TCGCAAGGTC TTAAAGTCAG CCGTCTATTA CGTACGAGCT ATGGTAATAT TACATTGCCA AAAGAGCTGC GTACAGGGCG CTTCTTAGAG CTAGATAGAA AAGACATTAA TACGTTAACA GACCTAGTGA GCTTACGCCC GCGTTATGGT ACAGGTCTTC ATGGTGCTGC TAAAGAAAAG CAAGAGCGTA TCAGAAACAA GCCGCTTAAA GCACGTCGTA CTGACACTCG TGGCGATAAT CGTAATAGCA CTAGTAGTGC CAAACCGAAA AGCAGTGCAA GTCCTGTCAG TCGCGGCACC CGTAATACCC GTGACCGCAA CGATAAACGC TAA
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Protein sequence | MKDEKLQKAL ARMGLGSRRQ MEEVIKAGRV TVNNGPATIG DRVEQGDEIR VDGRQIKYTS ENEKRRRVLA YYKPEGEVCS ANDPEGRPTV FERLPKLTHD RWVMVGRLDI NSTGLLLFTN DGEMAHRLMH PSSEVTREYA VRVLGDVTPD MARAMTTGVM LEDGMAKFED IKEGGGEGVN KWHHVQLKEG RNREVRRLFE SQGLKVSRLL RTSYGNITLP KELRTGRFLE LDRKDINTLT DLVSLRPRYG TGLHGAAKEK QERIRNKPLK ARRTDTRGDN RNSTSSAKPK SSASPVSRGT RNTRDRNDKR
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