Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0490 |
Symbol | rpsC |
ID | 4035833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 596253 |
End bp | 596981 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637972945 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_579757 |
Protein GI | 93005320 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000127993 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0282319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAAA AAGTACATCC AATCGGAATT CGTCTTGGTG TTGTAAAAAA GCATAACGCA AACTGGTATG CTAGCCCTAA ACAATACTCA GAATACCTAA TTAACGACAT TCAGGTTCGT GAATATCTGC GCAAGAAACT TGATAGTGCT ATGATTAGCA AGATCATGAT TGAGCGTCCT ACTGGTGCTG CTAAGATTAC CATCGCCACT GCGCGTCCTG GTATTGTTAT CGGTAAGAAA GGCGAAGATA TTGAAAGACT TCAAAAAGAA TTGACCAAAA TTATGGGCGT ACCTGCTCAG GTCAACATTG AAGAAATCAC CTCGCCTGAT CTTGATGCTC ATTTAGTAGC GGAAGGCATC GCAAGTCAGC TTGAGCGTCG TGTGATGTTC CGCCGTGCTA TGAAGCGTGC GGTACAGAAC AGCATGCGTT CTGGTGCTAA AGGTATTAAA GTTGAGCTGT CTGGCCGTCT TGGCGGTGCT GAGATTGCTC GTACTGAATG GTACCGTGAA GGTCGTGTGC CACTGCATAC ACTACGCGCT GATATCGACT ATTCGTCAGT ACGTGCGGAA ACCACTTACG GCACCATCGG TGTAAAAGTT TGGATCTTCC GTGGCGAAAT CCTTGACGGT ATGAACAGTG TATACAATCC CGTTAAAGAA GAGCAGACTC GTGCGCCAAA ACGCCGTGGT CGTGGAAACG GAAACCGTCG AAACACAGAC AGAGGTTAA
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Protein sequence | MGQKVHPIGI RLGVVKKHNA NWYASPKQYS EYLINDIQVR EYLRKKLDSA MISKIMIERP TGAAKITIAT ARPGIVIGKK GEDIERLQKE LTKIMGVPAQ VNIEEITSPD LDAHLVAEGI ASQLERRVMF RRAMKRAVQN SMRSGAKGIK VELSGRLGGA EIARTEWYRE GRVPLHTLRA DIDYSSVRAE TTYGTIGVKV WIFRGEILDG MNSVYNPVKE EQTRAPKRRG RGNGNRRNTD RG
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