Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0256 |
Symbol | |
ID | 4034642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 302822 |
End bp | 304024 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637972705 |
Product | general secretion pathway protein F |
Protein accession | YP_579524 |
Protein GI | 93005087 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.726784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCTT ATCATTATAA AGCGCTTGAC GATCGTGGCG GCATCCAAAA AGGCTTGCTT GAAGGTGATT CTGCGCGGCA AGTACGCCAG CAGCTGCGTG ATAAACAATG GACGCCTGTC GAAGTCAACG CCGTCAATGA TAGGCAAAGT CAACATAAAA GCCGCTATAA AAAACCCTCT GCTTATGAGT TGGCACTGCT TACCCGCCAG TTATCTGTGT TACTTGCTGC TGGTATTCCG TTAGAGGAAA CCTTGGCAGC TGTCGCCAAA CAATCGCCAA AAACCCATAT CAAATCTTTG ATACTTGCCG TGCGCTCGCA TGTCCTAGAA GGTCTCAGTT TGGCGCGCGC TTTGCAGCAA GCGGCGAGCT TTCCCCCACT ATATATCGCT ACCATTGCAG CTGGAGAAAA ATCTGGTCAT TTGGATTTGA TCTTAAATCA GCTTGCCGAT TACACGGAAA ATCGCTTTGC CTTACAGAAA AAAATACAAG GCGCTATGGT TTATCCCATC GTGCTGATGG TGATGGCAGT TGGCGTAATT ATGGGGTTAA TGAGCTTTGT AGTACCAAAA ATTGTCAAAG TGTTTGAGCA GTCCGAACAA GCTCTGCCTT TAATTACCCA AATTGTCCTT AGCTTATCAA ATATTATTAC CCAGTGGTGG TGGCTGATGC TGCTGGTGTT GGCAGGAACG GCATTTTTAT TCTATCGCTT TGCTCAGACG CAAGCGGGCA AGCTGGCCAT AGATAGTGCT GTGCTAAGAT TGCCTATACT GGCACGCTTA TCGAAAGGGT TGAATGCGGC GCGCTTTGCC AGTACGCTTG CGATATTGGT GCGCTCTGGT GTGCCATTGA TTGAGGCGCT CCATATTGGC GCTGCGGTCA CCACCAATTT GCATATTCAA AAAACCATCA TTACTGCTGC GGATAGAGTA ACAGAGGGTT CAAGTCTGTC GAGTCAATTA GACAAATCGC CCTATTTTCC GCCGATGATG GTACAAATGA TTAAAAGTGG TGAAAACTCG GGCGAGCTTG AAAATATGCT TAGCCGTGCT GCCAATATGC AGGAGGCAGA AGCCACCAAT TTCATTAGTA CTTTATTGTC ATTACTTGAG CCTTTAATGC TGGTGCTGAT GGGTGTGGTC GTCATGATTA TCGTAATGGC GGTGATGCTG CCAATTGTGA ATATGAATGA CTTGGCTGGC TAG
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Protein sequence | MPAYHYKALD DRGGIQKGLL EGDSARQVRQ QLRDKQWTPV EVNAVNDRQS QHKSRYKKPS AYELALLTRQ LSVLLAAGIP LEETLAAVAK QSPKTHIKSL ILAVRSHVLE GLSLARALQQ AASFPPLYIA TIAAGEKSGH LDLILNQLAD YTENRFALQK KIQGAMVYPI VLMVMAVGVI MGLMSFVVPK IVKVFEQSEQ ALPLITQIVL SLSNIITQWW WLMLLVLAGT AFLFYRFAQT QAGKLAIDSA VLRLPILARL SKGLNAARFA STLAILVRSG VPLIEALHIG AAVTTNLHIQ KTIITAADRV TEGSSLSSQL DKSPYFPPMM VQMIKSGENS GELENMLSRA ANMQEAEATN FISTLLSLLE PLMLVLMGVV VMIIVMAVML PIVNMNDLAG
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