Gene Pcryo_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0180 
Symbol 
ID4034344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp211393 
End bp212046 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content45% 
IMG OID637972624 
ProductRDD domain-containing protein 
Protein accessionYP_579448 
Protein GI93005011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000223601 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGA GTTTATCCAA ACGCCCGTCT AAATCCGCTG CTAAAGCCAA AAAATCTGCA 
CCTCATACCT CTGAGGTTGA AGAGCTAGCG ATTGCTAAAC CCAGCACCCG CATGGCAGCG
ATTCTTTATG ATGGTATGCT GATTTTAGCA TTATTATTTT TGGTAGGGAC GGTGCTGACG
GTGATTGGCA CCTTGTTGAC GATGGAGACG GGTAGCGAGT CGTCACAAGC TCAATCACTG
CCAACATGGT ATCAAAACGT TATTATGACA CCCTCTTTTA TCCTGACGTT GGTAGGGTTT
TATGGGTTGT TCTGGCGTCG TGGTGGGCAG ACATTAGGTA TGCAGACTTG GCGGCTTAAA
ACCGTTAATA ACAACGGTCA TCTGCTCACG TGGGGGCAAT CCTTTAAGCG TGTTCTAGCA
GCTAGTATCA TGCCACTTAT ATTTGGCCTC ATTGGTAGTG TCATCGGTGG CTCGCGCGCT
ATTTTATTGA CCAGTGTCTT TCTGGGCTTT GTTTTTAATT ATGCTTTTTG CCTATTCAAC
TCACGTGGTC TCGCAGTGCA AGATATGCTA TCTAATACCA TTACCTTAAA AATGCCAAAA
ACAGAGAATG AAGGACTATG GCGAGTGATT AGAAACCGCA AGCGAGGAAA ATAA
 
Protein sequence
MSKSLSKRPS KSAAKAKKSA PHTSEVEELA IAKPSTRMAA ILYDGMLILA LLFLVGTVLT 
VIGTLLTMET GSESSQAQSL PTWYQNVIMT PSFILTLVGF YGLFWRRGGQ TLGMQTWRLK
TVNNNGHLLT WGQSFKRVLA ASIMPLIFGL IGSVIGGSRA ILLTSVFLGF VFNYAFCLFN
SRGLAVQDML SNTITLKMPK TENEGLWRVI RNRKRGK