Gene Pcryo_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0115 
Symbol 
ID4034239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp136506 
End bp137381 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content45% 
IMG OID637972557 
Productsuccinyl-CoA synthetase, alpha subunit 
Protein accessionYP_579383 
Protein GI93004946 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.732037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTAT TAATTGATAA AGACACCAAA GTATTGGTGC AAGGTTTTAC CGGTAAAAAT 
GGTACGTTCC ACTCAGAACA AGCCATCGAA TATGGTACAA AAGTTGTTGG CGGCGTAACC
CCAGGTAAAG GCGGTCAAAC GCACCTAGGT TTGCCAGTAT TCAACACCAT GTCTGAAGCA
ATGGCAGCCA CCCAAGCAGA CGCTTCTGTT ATCTATGTAC CAGCTCCTTT TGTACTAGAT
TCTATCATCG AAGCAATTGA TGCTGGTGTG AAGCTAATTG TTGTGATCAC TGAAGGTGTA
CCAACGCTTG ATATGCTTAA AGCCAAACGC TACCTTGAAA CAGCAGGCGA TGTACGTCTA
ATCGGTCCTA ACTGCCCAGG CGTTATCACC CCAGGTCAGT GCAAAATCGG CATCATGCCA
GGTCATATCC ATTTGCCAGG TAAAGTGGGT ATCATCTCAC GCTCTGGTAC TTTAACTTAT
GAAGCCGTTG CTCAAACCAC TAAGCTTGGT TTTGGTCAAT CAACCTGTAT CGGTATCGGT
GGTGATCCGA TCCCTGGTAT GAACCAGATT GATGCGCTTA AATTGTTCCA AGAAGATCCA
CAAACTGAAG CAATTATCTT AATCGGTGAA ATTGGTGGTA CTGCTGAAGA AGAAGCAGCC
GCTTATATCA AAGACCATGT AACTAAGCCA GTTGTTGGTT ATATTGCTGG TGTAACTGCT
CCTGAAGGTA AGCGTATGGG TCATGCCGGC GCTATCATCT CTGGCGGTCA AGGTACAGCT
GAAGATAAAT TTAAAGCGTT TGAAGCGGCA GGTATTGCTT ACACGCGTGA CCCATCAAAA
TTGGGCGAGA AGCTAAAAGA AGTGACAGGT TGGTAG
 
Protein sequence
MSVLIDKDTK VLVQGFTGKN GTFHSEQAIE YGTKVVGGVT PGKGGQTHLG LPVFNTMSEA 
MAATQADASV IYVPAPFVLD SIIEAIDAGV KLIVVITEGV PTLDMLKAKR YLETAGDVRL
IGPNCPGVIT PGQCKIGIMP GHIHLPGKVG IISRSGTLTY EAVAQTTKLG FGQSTCIGIG
GDPIPGMNQI DALKLFQEDP QTEAIILIGE IGGTAEEEAA AYIKDHVTKP VVGYIAGVTA
PEGKRMGHAG AIISGGQGTA EDKFKAFEAA GIAYTRDPSK LGEKLKEVTG W