Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0090 |
Symbol | |
ID | 4034216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 102843 |
End bp | 104753 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637972532 |
Product | ABC transporter related |
Protein accession | YP_579358 |
Protein GI | 93004921 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCTC TATTTCGCTT TTTTGAAAAT CGCCTGCCGG CCTTCCCTGA AACACCGATG CCACTACCCT CACCTCGTGA TGGCATGCTA AAGTTTCTGT GGGCGTGCAC CAATGGTTTA CGCGGCTGGC TACTGCTATT TATGATTTTG TCAGCCGGTA TCGGTATTTA CGAAGCCATG CTCTTTGCTT GGATTGGAAA TATCGTTGAC TGGCTTGGGG TTTATACCCC GCAAAATCTG TGGCTAGAAA AAGGCGACAT GCTGCTGCTC ATGCTGGCGG TGATGATTGT CAGCCCATTA TGGATTGCCT TATCCTCATT TATCCATTTT CAAACCTTGC AAGGGGTATT CCCCATGCAG ATGCGCTGGC GTTTTCATCA GCGTATGCTT GGTCAATCGA TGCAGTTTTA TCAAGATGAA TTCTCCGGTC GCGTTTCTGC TAAAGTGATG CAAACCGCAT TGGCAGTACG TGATACCGTT ATGACAGTTA CTGACATGTT TATGTATGTC GCTGTCTATT TTATTACTTC AGGTATCATT CTCTTCAATC TTGATAGTTT GCTACTGATT CCCTTTATCG CGTGGTTTGT ATTAGTTTGG CTTGCGATGT GGTATTTCAT ACCTAAACTC AAACAAACGG CTATTGTACA AGCAGATGCT CGCGCCTTGA TGACGGGGCG CATTACTGAT GCCTACGCCA ATATTATGAC CGTCAAGCTG TTTAGTCACT CGCGCCGTGA GCTCAGTTAC GCCAAAAACG CCATGGGGCA GTTTTTGGGT ACCGTCCATG CACAAATGCG CTGGGTCAGC TATCTTGAGT TTTCAACGCA TTTGATTAGT GTTGTTTTGG TCAGTAGTAC TGCTGGTATT GGCTTGTATT TATGGCAACA AGAAGCCATT GGTGTCGGTG CTATTGCTGC TGCAACTGCT ATGGCGCTAC GCTTGAATGG TTTAACGCGC TGGATTATGT GGCAGACGGC AAGTTTGTTT GAAAGTATCG GTACGGTACA GGACGGTATG CGTACCTTAT CTGCACCGCA AACCATCATT GACAAACCCA ATGCACCAGC TTTAAAAGTC ACAGAAGGTC GTATCGTCTT CGATCATGTT GACTTCAGTT ATGAGAATGA CAGCGATGAT ACAGACAATA ACGATGGTGG AAATTTAAAC GACGGTAACC TATCAGCCAC GTCTACTATC AAACTTCTCG ATAATTTTTA CTTGGACATC AAACCCGGCG AAAAAATCGG TCTGGTTGGA CGTTCAGGTG CCGGCAAATC CACCTTGGTC AATCTACTCT TACGCTTCTT TGATGTCGAT AAAGGTAAAA TCCTCATTGA TGGTCAGGCG ATTGATGAAG TGACCCAAGA GTCCTTACGT CAGCAAATCG GCATGGTGAC CCAAGATACC TCTTTATTAC ATCGTACCGT ACGCGAAAAT ATTGCTTATG GTCGTCCTGA TGCTACTGAC GAGCAGATTA TCATCGCAGC AAAACAAGCT CAGGCATGGG ACTTTATCAA AGATTTATAT GATGATAAAG GCAACATGGG GCTGGATACT CAAGTTGGTG AACGCGGCGT CAAACTTTCG GGTGGGCAGC GTCAACGTAT TGCCATCTCA CGTGTTATGC TAAAAAACGC GCCTATTCTA CTGTTAGATG AAGCCACCAG TGCGCTCGAT TCTGAGATCG AATTTGCAAT TACTGAAAGC CTGAACGATA TTATGACTGG CAAGACAGTT ATTGCCATCG CCCATCGCTT ATCAACCATT GCTGCTCTTG ATAGACTGGT TGTGATGGAT AAAGGTCAAA TTATTGAGCA AGGCAGCCAT GATGAACTAT TGAATCTACA TGGTATCTAT GCACGATTAT GGCATCGCCA AAGCGGCGGC TTCTTAGGTG AAGACAGTTA A
|
Protein sequence | MNALFRFFEN RLPAFPETPM PLPSPRDGML KFLWACTNGL RGWLLLFMIL SAGIGIYEAM LFAWIGNIVD WLGVYTPQNL WLEKGDMLLL MLAVMIVSPL WIALSSFIHF QTLQGVFPMQ MRWRFHQRML GQSMQFYQDE FSGRVSAKVM QTALAVRDTV MTVTDMFMYV AVYFITSGII LFNLDSLLLI PFIAWFVLVW LAMWYFIPKL KQTAIVQADA RALMTGRITD AYANIMTVKL FSHSRRELSY AKNAMGQFLG TVHAQMRWVS YLEFSTHLIS VVLVSSTAGI GLYLWQQEAI GVGAIAAATA MALRLNGLTR WIMWQTASLF ESIGTVQDGM RTLSAPQTII DKPNAPALKV TEGRIVFDHV DFSYENDSDD TDNNDGGNLN DGNLSATSTI KLLDNFYLDI KPGEKIGLVG RSGAGKSTLV NLLLRFFDVD KGKILIDGQA IDEVTQESLR QQIGMVTQDT SLLHRTVREN IAYGRPDATD EQIIIAAKQA QAWDFIKDLY DDKGNMGLDT QVGERGVKLS GGQRQRIAIS RVMLKNAPIL LLDEATSALD SEIEFAITES LNDIMTGKTV IAIAHRLSTI AALDRLVVMD KGQIIEQGSH DELLNLHGIY ARLWHRQSGG FLGEDS
|
| |