Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0063 |
Symbol | |
ID | 4034187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 71273 |
End bp | 72952 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637972503 |
Product | DNA repair protein RecN |
Protein accession | YP_579331 |
Protein GI | 93004894 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.352457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTAGTAT CATTAACTTT AAATCAGTTT GCGTTAATTG CTCAGCATGA GCTGAGTGTG GCTGAAGGCT TCAATGTCAT CACTGGTGAA ACAGGCGCTG GCAAATCGCT ATTACTCGAT GCGCTGTCTT TATGTATCGG CGAGCGCGCA GACAGTGCGA TGGTCCGGCA TGGCGCGGCG CACGCGGATA TCTACGCGCA ATTTGATGTA GAAAACAATA GTATCATTGC TGAATGGTTT GCCAAAAATG AGCGGGCGTT AGAAGAGCCA GATGTATTGA TTCGTCGACA ACTCAGTAAT ACAGGGCGCT CAAAAGCATG GTTAAATGGT ACACCTGTCA GTTTGGCTGA GCTTAAGAGT TTGGGTGCAT TGCTGGTCAA TATTCATAGT CAACATGCTC AGCAGGCGCT ACTCAAGCCA CAATTTGTAG TGCAATGGCT AGATGAAATG GCACAGATAA CTTCTCTTGC TACGCAGACC TCAAGTAGCT ATCAAGCTTA TCAGCAACTT AAACGCCGCG CTGACGATCT CGCTAGCCGT GAAGCTCAGC GCCAAGATCG TATTCAACTG TTGCAAAGCC AGTTAGCAGA TATCGCACCG TTATTGGTCG TTGATTATGC TGAAGTAGAA GCAGAACACG AAGAATTATC CAATATTGAA GCACTAATGA TTGAGGCCAG TCATGGCTTG CATTTACTCG ATAATGATAC CGATGAGCCC GATATAATGA CCTTGCTCGG GCAAGCAATT AAACTATGCG ATAATCAAAT GAACGTGAGC CAAACCTTTG AGCAAGCCTC AGAACAGCTA CATTTAGCGC AGCAGCAAAT CACTGAAGTG ACTGGCTTAT TGTCAGATTA TGCTGAGCAG CAATTGCCTG ACCCTGAGCG TTTGCAGTCA TTAGACAGTT TAATCAGCTT AGGTCATCGC CTATCACGTA AGCATAACTT GCCAGCTAGC GACTTGATTA ATGAAGCAAA AGGCTGGGAA GCGCAATTAG AACAATTAGA AAACGAGCCA AGCAGTGATG CAATGGCGGC ACAAATTGAG CAAGCATGGC AAGAGTATAT AGCACTAGCA ACTGAGCTAA ATAAAAAACG GGCTAAAGCT GCACCGATTG TCAGCAAACA GCTGATTAAG CAACTACAGC CGCTTGCCCT ACCTAATGCA CGTTGTGAAT TCGTTTTTAC CAAAAAGACC GATGTCAGCC AATATAGTGG ACAAGGCTGT TATGATATCG ACTTATTATT CAGCGCCAAC GTCGGTATGC CGATGCAGCC GCTACACAAA ATCGCTTCAG GCGGTGAGCT ATCACGTATG GCACTAGTGA TGCAGGTCTT GCAAGCGACC AATGCAGATA ATAATGCGGC AAAACCTATG CTAGTCTTTG ACGAAGTTGA TGTTGGTATC AGTGGCGGTA CGGCGCAAGT GGTGGGCGAG CTGTTGCGCG CCCTTGGGCA AACGCAGCAA TTACTAGCCA TTACCCACCA AGCCCAAGTC GCCGCGCAAG CGCATCAGCA TATCTTGGTA CAAAAACACC ATGACGAGCA AACTGAAAGT GAGCTTGTCA TCTTAACCGA GAGTGCGCAA GTAGATGAGC TGGCACGTAT GTCTGGTGGT GTTATTATCA CCGATGTCAC TCGTGACCAT GCGCGCAGTC TATTGAGCGA TGTTAAATGA
|
Protein sequence | MLVSLTLNQF ALIAQHELSV AEGFNVITGE TGAGKSLLLD ALSLCIGERA DSAMVRHGAA HADIYAQFDV ENNSIIAEWF AKNERALEEP DVLIRRQLSN TGRSKAWLNG TPVSLAELKS LGALLVNIHS QHAQQALLKP QFVVQWLDEM AQITSLATQT SSSYQAYQQL KRRADDLASR EAQRQDRIQL LQSQLADIAP LLVVDYAEVE AEHEELSNIE ALMIEASHGL HLLDNDTDEP DIMTLLGQAI KLCDNQMNVS QTFEQASEQL HLAQQQITEV TGLLSDYAEQ QLPDPERLQS LDSLISLGHR LSRKHNLPAS DLINEAKGWE AQLEQLENEP SSDAMAAQIE QAWQEYIALA TELNKKRAKA APIVSKQLIK QLQPLALPNA RCEFVFTKKT DVSQYSGQGC YDIDLLFSAN VGMPMQPLHK IASGGELSRM ALVMQVLQAT NADNNAAKPM LVFDEVDVGI SGGTAQVVGE LLRALGQTQQ LLAITHQAQV AAQAHQHILV QKHHDEQTES ELVILTESAQ VDELARMSGG VIITDVTRDH ARSLLSDVK
|
| |