| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0045 |
|---|
| Symbol | |
|---|
| ID | 4034835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 53052 |
|---|
| End bp | 55043 |
|---|
| Gene Length | 1992 bp |
|---|
| Protein Length | 663 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637972485 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_579313 |
|---|
| Protein GI | 93004876 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.919141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.873152 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAT TTAAAGACGT TGGTGTTCGC CGTGATGGTC GTGAGTTGTT TGCAGGGGCA
AGCTTCCAGC TACATCCGGG CCACAAAGTT GGCTTAACGG GCAATAACGG CACCGGCAAA
TCAACCTTGT TTGCCTTATT ATTGACGCGT ATGGGCACTG GCGATACCGA AGTGACGCTA
GATAAAGGCG AAGTGAATAT TCCTGATAGC TGGCATGTGG CGCATATGGC GCAGGAAGTT
GGCGCGACCA CACAGACGGC GATTGATTAC GTGCTAAGCG GTGATGAGCA GTGGTACGAG
ATTAACGCTA CTTTGAATGA TTTAAGCAGT GTCAGTGATG AGCAAATCGG TGTGCTACAT
CAGCAGTTTG ATGAAATCGA TGGCTATCGT ACCCCAACCA AAGCGGCACA AATCATGGCG
GGTCTTGGTT TTAATACTAG CCAACATGAA TTGCCAGTAG AAGGGTTTTC TGGTGGCTGG
CGTATGCGTC TAAACCTTGC TAAGACCTTG ATGAGCCGCG CTGACTTAAT GCTACTTGAT
GAGCCAACCA ACCATTTGGA TTTGGATGCT ATTCTTTGGC TTGAGACTTG GATTAATGCC
TTTACTGGTT TAGTCATCGT CATCTCGCAT GACCAAACTT TCTTAGATAA TACTGTCGGT
CATATTTTGC ACGTTGAGCA GCAAAAAATC ACCCTTTATA CAGGTAACTA TCAACAGTTT
ATTCGTACCC GTCATGAGCG TATGGCGCAG CAGCAGCAAG CGTTTGAGAA GCAAGAAGCG
ACCAAAGCAC ATTTGGATGA CTTTATTCGT CGCTTCCGTG CAAAGGCTAG TAAAGCCAAG
CAAGCACAGA GCCGTATTAA GCAGCTTGAG CGTATGGCGG AGCTGTCTCC GATGATGGCG
GATAACCCGT TCTCGTTCCG CTTTTATGAG CCGGCAAATA TGAGCTCGCC ATTGATTGAG
TTGACCGATG CGGATATTGG TTATAGCGAC ACGCCGCTAC TTTATAATGC AAACGTACAA
GTCACTCCTG ATACTCGTAT TGGGCTGCTT GGAATGAATG GCGCTGGTAA GTCGACCTTG
ATTAAAGCTT TGGTCGGTGA GCTTGGCGTA TTAAAGGGCA GCTATAACGT TTCTGATACG
CTAAAGCTTG GCTACTTTAA CCAGCATCAA ATGGATATTC TTGATCCGAA GGCAACGCCG
ATAGAGATGT TGCGTCGTTT GGCAGGTAAA ACGTCTGATG CGATGTTACG CTCGTTTTTG
GGTAGCTTTG ATTTCCGTGG CGACCGTATC GATACCATAA GCGAGCTATT TTCTGGTGGT
GAGCGTGCGC GCTTAACATT GGCTTTGATT GTTTGGCAAC GTCCGAACGT GCTGGTACTC
GATGAGCCAA CCAACCATTT AGACCTACAA ATGCGCCAAG CACTGACCAT TGCTTTGCAG
GGCTTTGAAG GGGCAGTGGT ATTGGTATCG CATGACCGTG AATTGATTGC CAACGTCTGT
GATGAGCTGT TTTTGGTACA TGATGGACAA ATCGATGAGT TTGATGGTGA TATAAGCGAT
TATGGTAAAT GGCTTGCCGA AAAGCGTAAG CAGGAAAATT CACAAGATAA AAATACCAGT
AAGAAAAAAA GCAAAAAAGA GAGTAAGAAG TTTGTTTCAC GTGAAACAGA TGCTAATTCA
GTAGGTAGCC AAGCAAGCAA GCAAGTGGGT AAAGATGCGC AGCGCAAGCT GGCCGCTGAA
CAACGCAAAT TAACAGCGCC TATTCGCCGT GATATTGAAA ATACAGAAAA GACCTTGGCA
ACAATTGATG GAAAGCTGCT GGTGTTAGAA GAAAAGCTGG CGAATACGGA TCTTTATGAA
GAAAGTCGTA AGGCTGATTT GATGATACTG CTGAATGAGC AAACCGCGCT ACAGCAGCAA
CATAGTCAAC ATGAAGAAAA ATTGCTACTG GCAATGACAA CCTTAGAAGA AATGGAAGCC
AATATCGGCT AA
|
|---|
| Protein sequence | MIEFKDVGVR RDGRELFAGA SFQLHPGHKV GLTGNNGTGK STLFALLLTR MGTGDTEVTL
DKGEVNIPDS WHVAHMAQEV GATTQTAIDY VLSGDEQWYE INATLNDLSS VSDEQIGVLH
QQFDEIDGYR TPTKAAQIMA GLGFNTSQHE LPVEGFSGGW RMRLNLAKTL MSRADLMLLD
EPTNHLDLDA ILWLETWINA FTGLVIVISH DQTFLDNTVG HILHVEQQKI TLYTGNYQQF
IRTRHERMAQ QQQAFEKQEA TKAHLDDFIR RFRAKASKAK QAQSRIKQLE RMAELSPMMA
DNPFSFRFYE PANMSSPLIE LTDADIGYSD TPLLYNANVQ VTPDTRIGLL GMNGAGKSTL
IKALVGELGV LKGSYNVSDT LKLGYFNQHQ MDILDPKATP IEMLRRLAGK TSDAMLRSFL
GSFDFRGDRI DTISELFSGG ERARLTLALI VWQRPNVLVL DEPTNHLDLQ MRQALTIALQ
GFEGAVVLVS HDRELIANVC DELFLVHDGQ IDEFDGDISD YGKWLAEKRK QENSQDKNTS
KKKSKKESKK FVSRETDANS VGSQASKQVG KDAQRKLAAE QRKLTAPIRR DIENTEKTLA
TIDGKLLVLE EKLANTDLYE ESRKADLMIL LNEQTALQQQ HSQHEEKLLL AMTTLEEMEA
NIG
|
|---|
| |