| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0022 |
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| Symbol | |
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| ID | 4034890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 26771 |
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| End bp | 28345 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637972462 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_579290 |
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| Protein GI | 93004853 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00967763 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTAAAA CAGATACCTC CATTGGTAAA CGGCGTGACC TCACCCAAGG CTCGATCCCG
AAAACCATGC TCTTATTTGC ATTACCAACC CTTGGGTCAT CTGCATTACA GTCATTAAAC
GGCTCGATCA ATGCTGTCTG GGTGGGTCGA TTTTTGGGTG AGGAAGCGTT AGCAGCGACA
GCCAACGGCA ATATCTTGAT GTTTATACTG ATCTCCTTCG TGTTTGGTTT CGGTATGGCG
TCTACTATTT TGATTGGTCA GGCAATGGGC AGCCGTGACA ACGCTATGGT TAAGAAAACC
ATGGGCACGG CGCTGGGCAG CATTATTCCG ATAAGCGTAA TAGTGTCGGC AGTAGGGTGG
ATATTTGCGC CGATGCTGCT TGAGCTGCTT GGTACGCCGG CAAGTGCTGT AGAGCTTGCC
CTAACCTATC TGCGCATGAT TTTTATTGCG ATGCCTGTCA CACTTACGTT TACGCTGATA
ATGATGGCAC TGCGTGGGAC GGGCGATTCG ACGACGCCGC TTTGGTTTAT CATTATATCG
GTCGTGATTG ACCTTATTTT GACGCCGACA CTGATTTTGG GTCTAGGACC ATTTCCCGAG
TGGGGCATAT TTGGCTCGGC TTTTGCAACA GCCGTCGCAA ATACGCTAGC GCTTATTGGC
ATGTTAGCCA CTATGTATCT GCGTGGCTCT GTGCTGACGC TTAAGTTGCC GGAGCTTCGC
TTTTTGCGCG CAGACCGAGA CATCCTGAAG TCGATGTTTT CAAAGGGTTT GCCGATGGGT
CTACAGATGA TTGTTATCTC TTCGGCAGCA TTAACAATGT TATCGCTGAT TAATCGCGAA
GGTGTGCAGA CCACAGCCGC TTATAGCGCA ACCCAGCAGC TTTGGACCTA CGTGCAGATG
CCAGCAATGG CGCTAAGTGC TGCGGCCAGT GCGATGGTTG CACAGAACAT CGGTGCCAAT
CAATGGCACC GAATCGCAGG GATCACACGC TGGGGACTGA TTTTTAATCT GACATTGACC
GGTTTTATTA TCATACTGCT AACCATTTTT GATGAGACCA TTCTGGGCTT GTTCCTTGGC
AGTGACAGTG AAGCGGTGCC GATTGGGCGT CATATTCAGC TAATGGCGAC ATGGGGTTTT
ATCTTTTTTG GGATAGCACA GGTTTTGTTT GGCACCATGC GTGCAAACGG TTATGTGATT
TGGCCGCTGA TTGTCATGGT CATTTCGATG TATCCAGTAC GTCTTGGATT TGCTTTCGGG
CTTTATCCTC TACTTGGAAC CGATGCCCTT TGGCTATCCT TTCCAGCAGG CATGGTGGCA
ACCGCCGTGA TGGGAGCAGG ACTATATTTG TACGGCGGAT GGCGCAAAGG CAAACACTTG
CCCGCAGAGG AAGCTGCGCA AAGGTCTGAG GAGTTTCGCG CGCATACAGG CACCAGTGCG
TCGTTTCGAG ATCTTGTACC GACGACTGTA TGGAAGCTGT CACCTTTGCG CCGTATCACA
AGGTTGCATC GACGACTTCA TAGAAGACTT CATCTTCATA GACTCCGTGT GATAAAAAAG
AATAAACGAC AATAG
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| Protein sequence | MSKTDTSIGK RRDLTQGSIP KTMLLFALPT LGSSALQSLN GSINAVWVGR FLGEEALAAT
ANGNILMFIL ISFVFGFGMA STILIGQAMG SRDNAMVKKT MGTALGSIIP ISVIVSAVGW
IFAPMLLELL GTPASAVELA LTYLRMIFIA MPVTLTFTLI MMALRGTGDS TTPLWFIIIS
VVIDLILTPT LILGLGPFPE WGIFGSAFAT AVANTLALIG MLATMYLRGS VLTLKLPELR
FLRADRDILK SMFSKGLPMG LQMIVISSAA LTMLSLINRE GVQTTAAYSA TQQLWTYVQM
PAMALSAAAS AMVAQNIGAN QWHRIAGITR WGLIFNLTLT GFIIILLTIF DETILGLFLG
SDSEAVPIGR HIQLMATWGF IFFGIAQVLF GTMRANGYVI WPLIVMVISM YPVRLGFAFG
LYPLLGTDAL WLSFPAGMVA TAVMGAGLYL YGGWRKGKHL PAEEAAQRSE EFRAHTGTSA
SFRDLVPTTV WKLSPLRRIT RLHRRLHRRL HLHRLRVIKK NKRQ
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