Gene Pcryo_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0004 
Symbol 
ID4034872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2971 
End bp4146 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content42% 
IMG OID637972444 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_579272 
Protein GI93004835 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000937309 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000468434 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAATTAT CGATTAATCG AGAGTCGTTA CTAAAAGCCA TTAACTTGAT CGCCAAGGCT 
GCTGATAAAC GCCATAATAT GGTTATTTTG GGTAATATCA AGCTACAGCT ATTTGAATCA
GAGCTTGTTT TGACCGCTTC TGATTTAGAA GTAGAGCTGA CATCGACGTT AAAATTGCCT
GCTGGAGCTT GTGTTGAAGC AGGTACGACG ACATTGCCTG CCACTAAATT AAGAGATATC
TGTAAATCTT TGCCTGCTCA AGCACAAGTC AGTCTGATAA CTCAAGAAAA CCAACGCTGC
TTATTGACCA GTGGCAAAAG TCGTTTTACC TTAGGTACAT TGCCTAGCGA AGACTATCCA
AGTTTGGGTA ACCCTGAAAA TATCACGCCA TTGACGATTA GCCGTAGTCG TCTTATTGAT
TTGATTCATA AGACCCAATT TGCGATGGCG ATTCAAGATG TCCGTTATTA TCTAACGGGT
ATGCTATTTG ATGTATCACA GCAGCAGTTA ACGACGGTTG CAACCGATGG TCATAGACTG
GCATTAGCAC GTAGTGTTAT TGAAGTCAGT GCTGATTTAA GTATGCAGGC TATCTTGCCA
CGTAAGGCTG TAATTGAGCT TGAGCGTTTG GCTACCGAGC TGGGCAAAAT GCTTGGTGAT
AAAGACAATG CCGTCACGTT GAGTTTCGGT CGTGAATTTT TGCAAGTGAG CTTACCATTT
GGTGACGTTG ATAGTGCAGG GCAGGTTAGT CAGGATTTGA TGGTGACTTT TACCGCGCGT
CTGATTGATG GTAAGTTTCC TGATTATCGC CGTGTGATGC CTAGCAATAC AGACAAACTT
GCTCTATTTA ATCAAGAGAA AATGATGGAT GTGCTGCGCC GTGTCGCGAT TTTGAGTAAT
GAGAAGTCTC GTGGCGTAGT ATTTAACTTT GCCAGTGATG GTATGGTAGA AGTACGTGCC
AATAACGCTG AGCAAGATGA AGCGGTTGAG ATGATTCAAG CTAAGTATCA AGGCGAGCCA
ATGGAGTTGT CTTTTAATGC TGCTTATTTA CAAGACGTGC TAGGTGTCAT CCAAGGCGAC
TTGCAAATGC ATATGAGCCA GTCAAATGCG TCAGTATTGG TTAATCAGTT AAATGATGAG
TTTCATCAGT ACGTTATTAT GCCAATGCGC ATATAA
 
Protein sequence
MQLSINRESL LKAINLIAKA ADKRHNMVIL GNIKLQLFES ELVLTASDLE VELTSTLKLP 
AGACVEAGTT TLPATKLRDI CKSLPAQAQV SLITQENQRC LLTSGKSRFT LGTLPSEDYP
SLGNPENITP LTISRSRLID LIHKTQFAMA IQDVRYYLTG MLFDVSQQQL TTVATDGHRL
ALARSVIEVS ADLSMQAILP RKAVIELERL ATELGKMLGD KDNAVTLSFG REFLQVSLPF
GDVDSAGQVS QDLMVTFTAR LIDGKFPDYR RVMPSNTDKL ALFNQEKMMD VLRRVAILSN
EKSRGVVFNF ASDGMVEVRA NNAEQDEAVE MIQAKYQGEP MELSFNAAYL QDVLGVIQGD
LQMHMSQSNA SVLVNQLNDE FHQYVIMPMR I