Gene Pcar_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_3107 
Symbol 
ID3725814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3625374 
End bp3625913 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content56% 
IMG OID637752718 
Productputative starvation-inducible outer membrane lipoprotein 
Protein accessionYP_358512 
Protein GI77920697 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3065] Starvation-inducible outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CGCTATTCTT GGTGCTTTTT CCAGCTCTGC TCGGTCTGCT GACAGGTTGT 
GGATCGGTTC TCTCCAAAGA CGCCCTGTAC GACGTCAACT ACGAAGTGGA ATATCCCCAA
CTGAAAGCCT CGCCGGAAAC GCACCTGGGC AAGACCATCA TCCTCGGCGG CTTGATTCTG
GAAAACCGGA TCACCGACGA CGGCTCCACT CTGGAAATCC TCAAATACAC CCTCGACAAG
CGGGACGAAC CGCAGGACCC CGATGAGCTG GGTGGACGCT TTTTGGCCCG CAGCGACCGA
CTGCTCGACC CGAGCATTTA TAAGGAAGGG AAACTTGTCA CCCTCACCGG CACCCTGCGC
GGCGTCGAGG TCCGGCCTAT GCAAAAAGCC CGTTACCACT ATCCGGTTTT CGAAATCGGC
GAACTTTACC TGTGGCCCGA GCAACGCTAT GATCGCCCCT ATCCCTACTA CCCCTACTAC
GGTCCGTTCC CGTACGGGTA CTATTATCCC TATTGGCGTG GACATCCCTA TTGGTGGTAA
 
Protein sequence
MKKSLFLVLF PALLGLLTGC GSVLSKDALY DVNYEVEYPQ LKASPETHLG KTIILGGLIL 
ENRITDDGST LEILKYTLDK RDEPQDPDEL GGRFLARSDR LLDPSIYKEG KLVTLTGTLR
GVEVRPMQKA RYHYPVFEIG ELYLWPEQRY DRPYPYYPYY GPFPYGYYYP YWRGHPYWW