Gene Pcar_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_3082 
Symbol 
ID3725789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3594872 
End bp3596305 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content59% 
IMG OID637752693 
Producttwo component sensor histidine kinase 
Protein accessionYP_358487 
Protein GI77920672 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTTTTC ACTCCCTGCG ATTCCGGCTT ACCGCCTGGT ATACCCTGAC CATCGTCGTG 
GTACTGGCGG TAAGCGGCTG CATCTGGTAC CAGCAGCTGT CCACCAGCCT GCTGGAGCAA
ACCGACCGCC GCCTGATGAA ACTGACCGAA GAAAGCCCTG CGTTACTGCA GGGCTTTTCC
GGACCGGATC GCTGCCGCGC ATTTTCCAAG TTCGTGCGCC GCCATCGCCA GGGCAATTTT
TATCGCCTGG TCGATGCTGC CGGCCAACCG CTGTGCAGCG AAGTCAACAG TATCGGAAAC
GCCCCGGACA TCGACCTCCG CACCCTGGAG GCCGCCGCTG AAAAGGGGCT GGTGATACAG
AGCTCCAGGC TCAAGAATGG CCCCTATCCC ATGCGGTTTC TGACCATGGC CATGGAACTC
AAGAATGGCG AGGTCATTTT TCTGCAGGTC GGCACCGGCT TGGGGATGGT TCGGGAACCG
CTACGGGAAC TGCGCACGCT GTTGCTGATA TTCAGCCCCA TAGCTTTACT GGCCGTATCC
ATTCTCGGCT GGTTTCTGGC CGGCCGTACC CTGGCGCCGG TCGAAAACCT GACCCGGGCC
ATGCGCCGCA TCAATGTGGA AAATCTCTCG CAGCGCCTGC CGCTTCGCTC CTCCGGCGAT
GAGTTGGCCC GCCTGGTCGA CACCTTCAAC TCCATGCTGG GACGCCTGGA AGAATCCTTC
CGCAAAATCA AGCAGTTTTC CGGCGACGCC TCCCACGAGC TGCGTACTCC CCTGACCATC
CTCAAGGGCG AAACCGAAGT CGCCCTGCGC TGGGCCAAAA CCCCTGAAGA ATTCCGCAAA
ATGCTCATAT CCGGCATGGA AGAAATCGAC CGGATGAGCC GCATCATCGA CGACCTGCTG
CTGCTGGCCA AAAGCGAAGG GGGGCAGAAA CCGCTGACCA TCAAGGAAAT GAGCCTCAGC
GACCTGTTGC AGGAGCTGTA TCTACAGGGC CGTTCCCTGG CTCAACCGAA ATCCATCGAA
CTGGTACTGC ATCCCAATGT TACCGAGGAG ATCCGGATCC TGGCGGATAA AATGCGACTG
CGCCAGGTAT TTCTCAACCT GATCGCCAAT GCCATCAATT ACACCCCTGA TGGCGGCCAG
GTGGAAATCT CCTTGTCCGT GGACGGGGAA CAGGATGAGG TCATCGTCAA GGTCAGCGAT
ACGGGTATCG GCATCCCTGC GGAGCATCTG CCGCATATCT TCGATCGTTT TTACCGGGTC
GACCGAGCCC GCAATCGGGA AGACGGCGGT ACCGGCCTGG GACTGGCCAT CGTCGACTCC
TTCGTCAAGG CTCATGGAGG ACGAGTCGAG GTTTTCTCGG TTCCCGAAAA GGGCACTACC
TTTACCGTCT TTCTGCCACG CAAAGGACCG CAAACGCCCC CGGCGACCCC TTAG
 
Protein sequence
MFFHSLRFRL TAWYTLTIVV VLAVSGCIWY QQLSTSLLEQ TDRRLMKLTE ESPALLQGFS 
GPDRCRAFSK FVRRHRQGNF YRLVDAAGQP LCSEVNSIGN APDIDLRTLE AAAEKGLVIQ
SSRLKNGPYP MRFLTMAMEL KNGEVIFLQV GTGLGMVREP LRELRTLLLI FSPIALLAVS
ILGWFLAGRT LAPVENLTRA MRRINVENLS QRLPLRSSGD ELARLVDTFN SMLGRLEESF
RKIKQFSGDA SHELRTPLTI LKGETEVALR WAKTPEEFRK MLISGMEEID RMSRIIDDLL
LLAKSEGGQK PLTIKEMSLS DLLQELYLQG RSLAQPKSIE LVLHPNVTEE IRILADKMRL
RQVFLNLIAN AINYTPDGGQ VEISLSVDGE QDEVIVKVSD TGIGIPAEHL PHIFDRFYRV
DRARNREDGG TGLGLAIVDS FVKAHGGRVE VFSVPEKGTT FTVFLPRKGP QTPPATP