Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_3063 |
Symbol | hemC |
ID | 3725770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 3579768 |
End bp | 3580715 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637752674 |
Product | porphobilinogen deaminase |
Protein accession | YP_358468 |
Protein GI | 77920653 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCTA GCGCATTGCG TATCGGTACC CGCGCCAGCC GACTGGCCCT CTGGCAGGCC GAGTGGGTGC AGCAGCAACT GGAAACCCTG CATCCGGGCT TGTCCGTCGT CCTGGTGCCG ATCACCACCA AAGGCGACAA AATTCTCGAT GTGCCGTTGG CCAAGGTCGG TGGTAAGGGG CTTTTCGTCA AGGAGATCGA GGAGGCTCTG TACGACGGCA GCATCGATCT GGCGGTGCAT TCCATGAAGG ATGTCCCTTC CGTGTTGCCG CCGGGGCTGA TTCTGCCCTG CATTCCGCCA CGCGAGGATC CGCGCGATGC CCTGGTCACA CCGGATGGCC GCAGTTTTGC GCAGCTGCCC CAAGGTGCGC GCATCGGTAC TTCGGCCCTG CGGCGCCAGG CCCAGTTGCT GCATCGCCGC CCCGACCTGG ACATCGTTTC GCTGCGCGGC AACGTCGAGA CCCGGTTGCG GAAGATGGAA GAAGAGGACA TGGACGGTAT CGTACTGGCC GCCGCCGGTC TCAAGCGCCT GGAACTGGCG GAACGTATCG CCGAGTATCT GTCTGTCGAT GTAAGCCTGC CTGCCATCGG TCAGGGGGCG TTGGGACTGG AGTGCCGCGA AGGCGATGAC CGCACCCTGG AGCTGATCGC GCCTTTGCAT GATGCCGATA CCGCCGTAGC GGTGCGCGCC GAACGTGCGT TTCTGCGGCG TTTGAATGGC GGTTGCCAAG TGCCGTTGGC GGCGCATGCC ACGGTTGCCG AGCAGACCCT GACTATGGTC GGTCTGGTGG CCGAAGTCGA TGGGGGTAGT TTGATCAAGG AAACCCTTGC GGCCCCGGTG GCACAGGCCG AAGCCGTTGG CTGCCAATTG GCGGAGACGC TGCTGGCACG TGGTGCCGAT CGTATCCTTG CGGCTCTCGA TATCACTCCG ACCCCGTTGG TGCCCTGA
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Protein sequence | MSSSALRIGT RASRLALWQA EWVQQQLETL HPGLSVVLVP ITTKGDKILD VPLAKVGGKG LFVKEIEEAL YDGSIDLAVH SMKDVPSVLP PGLILPCIPP REDPRDALVT PDGRSFAQLP QGARIGTSAL RRQAQLLHRR PDLDIVSLRG NVETRLRKME EEDMDGIVLA AAGLKRLELA ERIAEYLSVD VSLPAIGQGA LGLECREGDD RTLELIAPLH DADTAVAVRA ERAFLRRLNG GCQVPLAAHA TVAEQTLTMV GLVAEVDGGS LIKETLAAPV AQAEAVGCQL AETLLARGAD RILAALDITP TPLVP
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